ARB_00470 (Arthroderma benhamiae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ARB_00470 T326464_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EFE32645 Sox 218 284

Links

Other Sox family TFs
Other Arthroderma benhamiae TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ABF4 Arabidopsis thaliana AT3G19290 D
LOC_Os05g36160 Oryza sativa LOC_Os05g36160 D
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I
BGIOSGA004837 Oryza indica BGIOSGA004837 I
Bo5g115300 Brassica oleracea Bo5g115300 I
Bra022409 Brassica rapa Bra022409 I
Bra037533 Brassica rapa Bra037533 I
BRADI2G24120 Brachypodium distachyon BRADI2G24120 I
F775_25077 Aegilops tauschii F775_25077 I
F775_32479 Aegilops tauschii F775_32479 I
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I
GLYMA04G04170 Glycine max GLYMA04G04170 I
GLYMA05G25200 Glycine max GLYMA05G25200 I
GLYMA06G04353 Glycine max GLYMA06G04353 I
GRMZM2G033413 Zea mays GRMZM2G033413 I
GRMZM2G132868 Zea mays GRMZM2G132868 I
GRMZM2G168079 Zea mays GRMZM2G168079 I
GRMZM5G858197 Zea mays GRMZM5G858197 I
GSMUA_Achr10G10440_001 Musa acuminata GSMUA_Achr10G10440_001 I
GSMUA_Achr3G22470_001 Musa acuminata GSMUA_Achr3G22470_001 I
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I
LPERR01G32620 Leersia perrieri LPERR01G32620 I
LPERR05G14180 Leersia perrieri LPERR05G14180 I
MLOC_34679 Hordeum vulgare MLOC_34679 I
MLOC_53321 Hordeum vulgare MLOC_53321 I
MLOC_64571 Hordeum vulgare MLOC_64571 I
MTR_3g101780 Medicago truncatula MTR_3g101780 I
OB01G46760 Oryza brachyantha OB01G46760 I
OB05G25740 Oryza brachyantha OB05G25740 I
OBART01G37980 Oryza barthii OBART01G37980 I
OBART05G17920 Oryza barthii OBART05G17920 I
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I
OGLUM05G18920 Oryza glumaepatula OGLUM05G18920 I
OLONG_014546 Oryza longistaminata OLONG_014546 I
OMERI01G34950 Oryza meridionalis OMERI01G34950 I
OMERI05G15500 Oryza meridionalis OMERI05G15500 I
ONIVA04G25730 Oryza nivara ONIVA04G25730 I
ONIVA05G18780 Oryza nivara ONIVA05G18780 I
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I
ORGLA05G0154900 Oryza glaberrima ORGLA05G0154900 I
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I
ORUFI05G19090 Oryza rufipogon ORUFI05G19090 I
OS01G0859300 Oryza sativa OS01G0859300 I
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I
PGSC0003DMG400029774 Solanum tuberosum PGSC0003DMG400029774 I
POPTR_0002s06800 Populus trichocarpa POPTR_0002s06800 I
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I
POPTR_0005s21500 Populus trichocarpa POPTR_0005s21500 I
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I
Sb03g040970 Sorghum bicolor Sb03g040970 I
Sb07g022965 Sorghum bicolor Sb07g022965 I
Sb09g021580 Sorghum bicolor Sb09g021580 I
Si003247m.g Setaria italica Si003247m.g I
Si006889m.g Setaria italica Si006889m.g I
Si017618m.g Setaria italica Si017618m.g I
Si030114m.g Setaria italica Si030114m.g I
Solyc01g104650.2 Solanum lycopersicum Solyc01g104650.2 I
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I
TCM_006432 Theobroma cacao TCM_006432 I
TCM_033824 Theobroma cacao TCM_033824 I
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I
TRIUR3_19588 Triticum urartu TRIUR3_19588 I
TRIUR3_33995 Triticum urartu TRIUR3_33995 I
Ca_01548 Cicer arietinum Ca_01548 I
Cla016272 Citrullus lanatus Cla016272 I
30170.m013868 Ricinus communis 30170.m013868 I
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I
Cucsa.219780 Cucumis sativus Cucsa.219780 I
mgf020824m Mimulus guttatus mgf020824m I
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I
Carubv10013729m.g Capsella rubella Carubv10013729m.g I
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I
Ciclev10002029m.g Citrus clementina Ciclev10002029m.g I
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I
Gorai.002G207000 Gossypium raimondii Gorai.002G207000 I
Gorai.005G259700 Gossypium raimondii Gorai.005G259700 I
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I
Lus10014066.g Linum usitatissimum Lus10014066.g I
MDP0000706379 Malus domestica MDP0000706379 I
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I
Pavir.Ea03718 Panicum virgatum Pavir.Ea03718 I
Pavir.J05659 Panicum virgatum Pavir.J05659 I
Pavir.J06257 Panicum virgatum Pavir.J06257 I
Pavir.J35078 Panicum virgatum Pavir.J35078 I
SapurV1A.0134s0060 Salix purpurea SapurV1A.0134s0060 I
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I
SapurV1A.0625s0150 Salix purpurea SapurV1A.0625s0150 I
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I
PK02169.1 Cannabis sativa PK02169.1 I
GBF4 Arabidopsis thaliana AT1G03970 N
Bo5g004230 Brassica oleracea Bo5g004230 N
Bo7g067030 Brassica oleracea Bo7g067030 N
Bra015281 Brassica rapa Bra015281 N
fgenesh2_kg.1__328__AT1G03970.1 Arabidopsis lyrata fgenesh2_kg.1__328__AT1G03970.1 N
GLYMA08G08220 Glycine max GLYMA08G08220 N
GLYMA10G36820 Glycine max GLYMA10G36820 N
GRMZM2G129247 Zea mays GRMZM2G129247 N
GSMUA_Achr9G08900_001 Musa acuminata GSMUA_Achr9G08900_001 N
MTR_1g098590 Medicago truncatula MTR_1g098590 N
mgf009464m Mimulus guttatus mgf009464m N
Bostr.26675s0358 Boechera stricta Bostr.26675s0358 N
Cagra.1671s0014 Capsella grandiflora Cagra.1671s0014 N
Carubv10011573m.g Capsella rubella Carubv10011573m.g N
gene11837-v1.0-hybrid Fragaria vesca gene11837-v1.0-hybrid N
Lus10028575.g Linum usitatissimum Lus10028575.g N
MDP0000208334 Malus domestica MDP0000208334 N
Thhalv10003246m.g Eutrema salsugineum Thhalv10003246m.g N
Thhalv10009710m.g Eutrema salsugineum Thhalv10009710m.g N
chr5.CM0052.120.nc Lotus japonicus chr5.CM0052.120.nc N