Bo6g005800 (Brassica oleracea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Bo6g005800 T326659_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g005800.1 Sox 63 88
Bo6g005800.1 Sox 89 107

Links

Other Sox family TFs
Other Brassica oleracea TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.455
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.476
MCOS_0000664501 Mesocestoides corti MCOS_0000664501 N 0.474
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.452
ASIS002444 Anopheles sinensis ASIS002444 N 0.416
CLEC004367 Cimex lectularius CLEC004367 N 0.424
MDP0000699531 Malus domestica MDP0000699531 N 0.468
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.511
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.523
Lus10016695.g Linum usitatissimum Lus10016695.g N 0.511
Lus10013219.g Linum usitatissimum Lus10013219.g N 0.485
Pm010381 Prunus mume Pm010381 N 0.472
Cla010647 Citrullus lanatus Cla010647 N 0.518
Ca_10726 Cicer arietinum Ca_10726 N 0.471
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.498
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.520
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.519
OLONG_009629 Oryza longistaminata OLONG_009629 N 0.429
MYCTH_2294733 Myceliophthora thermophila MYCTH_2294733 N 0.419
MBR_01289 Metarhizium brunneum MBR_01289 N 0.422
MAC_03708 Metarhizium acridum MAC_03708 N 0.422
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.463
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.476
HelroG178674 Helobdella robusta HelroG178674 N 0.486
TCF7L2 Tursiops truncatus ENSTTRG00000002360 N 0.501
Bra012832 Brassica rapa Bra012832 N 0.499