BRADI5G18460 (Brachypodium distachyon)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 BRADI5G18460 T326738_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI5G18460.2 Sox 111 184
BRADI5G18460.3 Sox 111 183

Links

Other Sox family TFs
Other Brachypodium distachyon TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA027814 Oryza indica BGIOSGA027814 I 0.427
OS08G0101100 Oryza sativa OS08G0101100 I 0.427
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I 0.427
OPUNC08G00150 Oryza punctata OPUNC08G00150 I 0.427
TCM_042534 Theobroma cacao TCM_042534 I 0.420
ONIVA08G00070 Oryza nivara ONIVA08G00070 I 0.427
OLONG_014445 Oryza longistaminata OLONG_014445 I 0.427
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I 0.427
OBART08G00070 Oryza barthii OBART08G00070 I 0.427
Gorai.009G186800 Gossypium raimondii Gorai.009G186800 I 0.416
BGIOSGA027819 Oryza indica BGIOSGA027819 I 0.427
fgenesh1_pg.4_#_114 Coccomyxa subellipsoidea C169 fgenesh1_pg.4_#_114 N 0.451
gw1.29.97.1 Naegleria gruberi gw1.29.97.1 N 0.420
Traes_2DL_6CACFD720 Triticum aestivum Traes_2DL_6CACFD720 N 0.603
Pavir.Ga01019 Panicum virgatum Pavir.Ga01019 N 0.428
Pavir.Gb00881 Panicum virgatum Pavir.Gb00881 N 0.428
Traes_2BL_3EF023231 Triticum aestivum Traes_2BL_3EF023231 N 0.576
Traes_2AL_020BC1DF2 Triticum aestivum Traes_2AL_020BC1DF2 N 0.576
Pavir.J10680 Panicum virgatum Pavir.J10680 N 0.420
fgeneshCV_pg.C_scaffold_4000123 Chlorella vulgaris fgeneshCV_pg.C_scaffold_4000123 N 0.451
BGIOSGA016928 Oryza indica BGIOSGA016928 N 0.609
Si011290m.g Setaria italica Si011290m.g N 0.611
Sb07g000230 Sorghum bicolor Sb07g000230 N 0.420
Sb06g025440 Sorghum bicolor Sb06g025440 N 0.448
TELCIR_05566 Teladorsagia circumcincta TELCIR_05566 N 0.426
OS04G0564600 Oryza sativa OS04G0564600 N 0.609
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N 0.609
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N 0.609
OPUNC04G19550 Oryza punctata OPUNC04G19550 N 0.609
ONIVA04G20340 Oryza nivara ONIVA04G20340 N 0.609
OMERI04G18350 Oryza meridionalis OMERI04G18350 N 0.609
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N 0.609
OBART04G21800 Oryza barthii OBART04G21800 N 0.609
OB04G28810 Oryza brachyantha OB04G28810 N 0.609
MLOC_57354 Hordeum vulgare MLOC_57354 N 0.584
LPERR04G17840 Leersia perrieri LPERR04G17840 N 0.602
GRMZM2G145968 Zea mays GRMZM2G145968 N 0.458
GRMZM2G125648 Zea mays GRMZM2G125648 N 0.420
F775_06533 Aegilops tauschii F775_06533 N 0.603