ssrp1a (Danio rerio)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSDARG00000037397 T327851_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.427 0.435
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000114529 Sox 546 614

Links

Other Sox family TFs
Other Danio rerio TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Q8W236_WHEAT Triticum aestivum Q8W236_WHEAT D
Q8GZQ2_MAIZE Zea mays Q8GZQ2_MAIZE D
LPERR09G12950 Leersia perrieri LPERR09G12950 I
Pavir.J27101 Panicum virgatum Pavir.J27101 I
Si031001m.g Setaria italica Si031001m.g I
Sb02g030320 Sorghum bicolor Sb02g030320 I
Sb02g030300 Sorghum bicolor Sb02g030300 I
OPUNC09G15260 Oryza punctata OPUNC09G15260 I
OBART09G16830 Oryza barthii OBART09G16830 I
BRADI2G60340 Brachypodium distachyon BRADI2G60340 I
GRMZM2G124037 Zea mays GRMZM2G124037 I
GRMZM2G124011 Zea mays GRMZM2G124011 I
GRMZM2G069146 Zea mays GRMZM2G069146 I
GRMZM2G069126 Zea mays GRMZM2G069126 I
GRMZM2G069082 Zea mays GRMZM2G069082 I
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I
BRADI4G35610 Brachypodium distachyon BRADI4G35610 I
BRADI4G35580 Brachypodium distachyon BRADI4G35580 I