Sb09g005650 (Sorghum bicolor)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Sb09g005650 T332422_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Sb09g005650.1 Sox 563 631

Links

Other Sox family TFs
Other Sorghum bicolor TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_29723 Aegilops tauschii F775_29723 I 0.647
mgf024995m Mimulus guttatus mgf024995m I 0.429
MLOC_27773 Hordeum vulgare MLOC_27773 I 0.638
Traes_1DS_C7F1E9F38 Triticum aestivum Traes_1DS_C7F1E9F38 I 0.647
Traes_1BS_15F9D276D Triticum aestivum Traes_1BS_15F9D276D I 0.647
Traes_1AS_3FCB35E65 Triticum aestivum Traes_1AS_3FCB35E65 I 0.647
ORGLA01G0051500 Oryza glaberrima ORGLA01G0051500 N 0.599
OPUNC02G20230 Oryza punctata OPUNC02G20230 N 0.548
ORGLA05G0049600 Oryza glaberrima ORGLA05G0049600 N 0.693
ORUFI01G05970 Oryza rufipogon ORUFI01G05970 N 0.599
ORUFI05G05850 Oryza rufipogon ORUFI05G05850 N 0.693
SSRP1-A Oryza sativa OS01G0184900 N 0.599
SSRP1-B Oryza sativa OS05G0182600 N 0.693
Sb03g003450 Sorghum bicolor Sb03g003450 N 0.597
Si000646m.g Setaria italica Si000646m.g N 0.597
Si021575m.g Setaria italica Si021575m.g N 0.729
Si024096m.g Setaria italica Si024096m.g N 0.650
Traes_3AS_AAAAD30B5 Triticum aestivum Traes_3AS_AAAAD30B5 N 0.580
TRAES3BF096800150CFD_g Triticum aestivum TRAES3BF096800150CFD_g N 0.580
TRIUR3_14091 Triticum urartu TRIUR3_14091 N 0.580
Pavir.Ca01033 Panicum virgatum Pavir.Ca01033 N 0.735
Pavir.Ea00282 Panicum virgatum Pavir.Ea00282 N 0.597
Pavir.J08546 Panicum virgatum Pavir.J08546 N 0.597
Pavir.J10741 Panicum virgatum Pavir.J10741 N 0.651
Pavir.J20558 Panicum virgatum Pavir.J20558 N 0.735
OBART05G05520 Oryza barthii OBART05G05520 N 0.693
BGIOSGA019295 Oryza indica BGIOSGA019295 N 0.693
BRADI2G33580 Brachypodium distachyon BRADI2G33580 N 0.635
F775_28104 Aegilops tauschii F775_28104 N 0.580
GRMZM2G032252 Zea mays GRMZM2G032252 N 0.597
GRMZM5G842484 Zea mays GRMZM5G842484 N 0.741
LPERR01G05200 Leersia perrieri LPERR01G05200 N 0.605
LPERR05G04880 Leersia perrieri LPERR05G04880 N 0.693
MLOC_6673 Hordeum vulgare MLOC_6673 N 0.561
OB01G15440 Oryza brachyantha OB01G15440 N 0.605
OB05G15230 Oryza brachyantha OB05G15230 N 0.693
OBART01G05540 Oryza barthii OBART01G05540 N 0.599
OPUNC05G05150 Oryza punctata OPUNC05G05150 N 0.693
OGLUM01G06010 Oryza glumaepatula OGLUM01G06010 N 0.599
OGLUM05G05400 Oryza glumaepatula OGLUM05G05400 N 0.693
OLONG_012679 Oryza longistaminata OLONG_012679 N 0.693
OLONG_023518 Oryza longistaminata OLONG_023518 N 0.599
OMERI01G05760 Oryza meridionalis OMERI01G05760 N 0.599
OMERI05G05210 Oryza meridionalis OMERI05G05210 N 0.693
ONIVA01G06280 Oryza nivara ONIVA01G06280 N 0.599
ONIVA05G05990 Oryza nivara ONIVA05G05990 N 0.693
OPUNC01G05380 Oryza punctata OPUNC01G05380 N 0.548
BGIOSGA002908 Oryza indica BGIOSGA002908 N 0.599