CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NCLIV_060790
(
Neospora caninum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
NCLIV_060790
T333448_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCLIV_060790
Sox
25
95
PKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQKLTYQKKAEQEKIRYQREMSLYN
Links
Other
Sox
family TFs
Other
Neospora caninum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra016546
Brassica rapa
Bra016546
N
Thhalv10018987m.g
Eutrema salsugineum
Thhalv10018987m.g
N
Thhalv10008528m.g
Eutrema salsugineum
Thhalv10008528m.g
N
Carubv10020753m.g
Capsella rubella
Carubv10020753m.g
N
Carubv10011014m.g
Capsella rubella
Carubv10011014m.g
N
Carubv10010086m.g
Capsella rubella
Carubv10010086m.g
N
Carubv10010045m.g
Capsella rubella
Carubv10010045m.g
N
Cagra.4153s0008
Capsella grandiflora
Cagra.4153s0008
N
Bostr.7128s0481
Boechera stricta
Bostr.7128s0481
N
Bostr.3288s0088
Boechera stricta
Bostr.3288s0088
N
MYB95
Arabidopsis lyrata
fgenesh2_kg.2__1707__AT1G74430.1
N
fgenesh1_pg.C_scaffold_1001692
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1001692
N
AtMYB47
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1001691
N
Bra025678
Brassica rapa
Bra025678
N
AtMYB47
Arabidopsis thaliana
AT1G18710
N
Bra015912
Brassica rapa
Bra015912
N
Bra015911
Brassica rapa
Bra015911
N
Bra008149
Brassica rapa
Bra008149
N
Bra003801
Brassica rapa
Bra003801
N
Bo8g091100
Brassica oleracea
Bo8g091100
N
Bo8g091080
Brassica oleracea
Bo8g091080
N
Bo6g118730
Brassica oleracea
Bo6g118730
N
Bo6g118710
Brassica oleracea
Bo6g118710
N
Bo6g087030
Brassica oleracea
Bo6g087030
N
Bo5g025790
Brassica oleracea
Bo5g025790
N
Bo5g025730
Brassica oleracea
Bo5g025730
N
Bo2g081100
Brassica oleracea
Bo2g081100
N
MYB95
Arabidopsis thaliana
AT1G74430
N