Thhalv10015680m.g (Eutrema salsugineum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Thhalv10015680m.g T334734_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10015680m Sox 18 59

Links

Other Sox family TFs
Other Eutrema salsugineum TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CHGG_01519 Chaetomium globosum CHGG_01519 I 0.421
PTTG_03070 Puccinia triticina PTTG_03070 N 0.446
OESDEN_13669 Oesophagostomum dentatum OESDEN_13669 N 0.483
PV06_10806 Exophiala oligosperma PV06_10806 N 0.494
SCHCODRAFT_111189 Schizophyllum commune SCHCODRAFT_111189 N 0.439
SPU_021871 Strongylocentrotus purpuratus SPU_021871 N 0.502
tetur32g01850 Tetranychus urticae tetur32g01850 N 0.416
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.443
Ca_14341 Cicer arietinum Ca_14341 N 0.445
36550 Aureococcus anophagefferens 36550 N 0.441
68433 Aureococcus anophagefferens 68433 N 0.418
estExt_fgenesh2_pg.C_1860002 Branchiostoma floridae estExt_fgenesh2_pg.C_1860002 N 0.420
fgenesh1_pg.sca_3_chr4_2_0000426 Nectria haematococca fgenesh1_pg.sca_3_chr4_2_0000426 N 0.453
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N 0.442
ANCCAN_05715 Ancylostoma caninum ANCCAN_05715 N 0.421
ASIM_0000075001 Anisakis simplex ASIM_0000075001 N 0.492
DICVIV_04576 Dictyocaulus viviparus DICVIV_04576 N 0.447
ACEP10857 Atta cephalotes ACEP10857 N 0.416
HelroG183534 Helobdella robusta HelroG183534 N 0.434
CMQ_5875 Grosmannia clavigera CMQ_5875 N 0.491
DAPPUDRAFT_259784 Daphnia pulex DAPPUDRAFT_259784 N 0.459
DDB_G0287433 Dictyostelium discoideum DDB_G0287433 N 0.419
EMIHUDRAFT_107556 Emiliania huxleyi EMIHUDRAFT_107556 N 0.524
EMIHUDRAFT_108701 Emiliania huxleyi EMIHUDRAFT_108701 N 0.503
ENSTBEG00000015540 Tupaia belangeri ENSTBEG00000015540 N 0.447
GD23231 Drosophila simulans FBgn0194620 N 0.421
GLOINDRAFT_98228 Rhizophagus irregularis GLOINDRAFT_98228 N 0.428
PODANS_7_7190 Podospora anserina PODANS_7_7190 N 0.418
M7I_1506 Glarea lozoyensis M7I_1506 N 0.438
MTR_6g048860 Medicago truncatula MTR_6g048860 N 0.417
NechaG79025 Fusarium solani NechaG79025 N 0.453
PFICI_01816 Pestalotiopsis fici PFICI_01816 N 0.415
Phyra76402 Phytophthora ramorum Phyra76402 N 0.421
PITG_13138 Phytophthora infestans PITG_13138 N 0.425
PITG_13146 Phytophthora infestans PITG_13146 N 0.425