CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LCUP017801
(
Lucilia cuprina
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
LCUP017801
T334878_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP017801-PA
Sox
239
277
IRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGFRH
LCUP017801-PA
Sox
285
322
QILSGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYK
Links
Other
Sox
family TFs
Other
Lucilia cuprina
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRV_02051
Trichophyton verrucosum
TRV_02051
N
0.460
PEQ_0000006801
Parascaris equorum
PEQ_0000006801
N
0.437
genemark-nMf.1.1.scaf01854-processed-gene-0.4
Meloidogyne floridensis
genemark-nMf.1.1.scaf01854-processed-gene-0.4
N
0.451
ASIM_0001132301
Anisakis simplex
ASIM_0001132301
N
0.609
ASIS002444
Anopheles sinensis
ASIS002444
N
0.634
CLEC004367
Cimex lectularius
CLEC004367
N
0.620
fgenesh1_pg.C_scaffold_10000369
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_10000369
N
0.455
Cmyd_10007727
Chelonia mydas
Cmyd_10007727
N
0.489
TSTA_110260
Talaromyces stipitatus
TSTA_110260
N
0.473
ARB_07320
Arthroderma benhamiae
ARB_07320
N
0.463
SINV25043
Solenopsis invicta
SINV25043
N
0.498
SCHCODRAFT_105718
Schizophyllum commune
SCHCODRAFT_105718
N
0.436
M407DRAFT_45069
Tulasnella calospora
M407DRAFT_45069
N
0.476
JAAARDRAFT_460099
Jaapia argillacea
JAAARDRAFT_460099
N
0.466
HelroG178674
Helobdella robusta
HelroG178674
N
0.484
GH16346
Drosophila grimshawi
FBgn0123817
N
0.598
BGIBMGA006156
Bombyx mori
BGIBMGA006156
N
0.521