CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
T265_00523
(
Opisthorchis viverrini
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
T265_00523
T337091_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T265_00523
Sox
240
298
RRLKAAYSAYEEKMLPILREENPGLRISQLKQMIFKKFQTAPENPKNQIHSSYNAGRQQ
Links
Other
Sox
family TFs
Other
Opisthorchis viverrini
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0004s07700
Populus trichocarpa
POPTR_0004s07700
N
POPTR_0017s01730
Populus trichocarpa
POPTR_0017s01730
N
TCM_015228
Theobroma cacao
TCM_015228
N
30169.m006225
Ricinus communis
30169.m006225
N
Ciclev10004502m.g
Citrus clementina
Ciclev10004502m.g
N
evm.TU.supercontig_107.91
Carica papaya
evm.TU.supercontig_107.91
N
Gorai.006G198300
Gossypium raimondii
Gorai.006G198300
N
Gorai.007G012300
Gossypium raimondii
Gorai.007G012300
N
orange1.1g041667m.g
Citrus sinensis
orange1.1g041667m.g
N
SapurV1A.1012s0040
Salix purpurea
SapurV1A.1012s0040
N