Myotis_brandtii_Tbx20_10020109 (Myotis brandtii)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 Myotis_brandtii_Tbx20_10020109 T341115_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.920 1.000
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.920 1.000
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.920 1.000
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.920 1.000
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.920 1.000
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.920 1.000
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.920 1.000
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.920 1.000
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.920 1.000
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.920 1.000
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.920 1.000
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.920 1.000
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.920 1.000
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.920 1.000
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.920 0.995
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.920 0.995
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.920 0.995
mid
M03994_2.00 		Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH		 SELEX
Nitta et al.(2015)
mid_1 		0.802 0.731
XP_001195863
M02498_2.00 		Strongylocentrotus purpuratus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2014)
pTH9340 		0.777 0.670
Tbx5
M00833_2.00 		Mus musculus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2013)
pTH3775 		0.754 0.610
TBX5
M03552_2.00 		Homo sapiens
AGGTGTBA
TVACACCT		 SELEX
Jolma et al.(2013)
TBX5_1 		0.754 0.610
TBX5
M03553_2.00 		Homo sapiens
AGGTGTKANWWNTVACACCT
AGGTGTBANWWNTMACACCT		 SELEX
Jolma et al.(2013)
TBX5_2 		0.754 0.610
Tbx5
M09649_2.00 		Mus musculus
AGGTGHBA
TVDCACCT		 Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529 		0.754 0.610
TBX5
M11374_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_01 		0.754 0.610
TBX5
M11375_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_02 		0.754 0.610
Tbx5
M11387_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_05 		0.754 0.610
TBX5
M11376_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q2 		0.754 0.610
TBX5
M11377_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q5 		0.754 0.610
TBX18
M05797_2.00 		Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH		 SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX 		0.752 0.659
TBX18
M11380_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX18_01 		0.752 0.659
TBX18
M05798_2.00 		Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN		 SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX 		0.752 0.659
Tbx4
M00831_2.00 		Mus musculus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2013)
pTH3973 		0.741 0.610
TBX4
M03558_2.00 		Homo sapiens
AGGTGTBA
TVACACCT		 SELEX
Jolma et al.(2013)
TBX4_1 		0.741 0.610
TBX4
M03559_2.00 		Homo sapiens
AGGTGTBANWWNTVACACBT
AVGTGTBANWWNTVACACCT		 SELEX
Jolma et al.(2013)
TBX4_2 		0.741 0.610
TBX15
M03554_2.00 		Homo sapiens
AGGTGTGAAATTCACACCT
AGGTGTGAATTTCACACCT		 SELEX
Jolma et al.(2013)
TBX15_1 		0.738 0.637
TBX15
M03555_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX15_2 		0.738 0.637
TBX15
M05795_2.00 		Homo sapiens
NRSGTGTBAN
NTVACACSYN		 SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX 		0.738 0.637
TBX15
M11378_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_01 		0.738 0.637
TBX15
M11379_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_02 		0.738 0.637
TBX15
M05796_2.00 		Homo sapiens
NDSGYGTBAN
NTVACRCSHN		 SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX 		0.738 0.637
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_Tbx20_10020109 T-box 71 257

Links

Other T-box family TFs
Other Myotis brandtii TFs

410 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I
OMERI11G06840 Oryza meridionalis OMERI11G06840 I
AC198403.3_FG001 Zea mays AC198403.3_FG001 I
OPUNC11G07750 Oryza punctata OPUNC11G07750 I
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I
OS11G0242300 Oryza sativa OS11G0242300 I
Sb05g007135 Sorghum bicolor Sb05g007135 I
Si026882m.g Setaria italica Si026882m.g I
Traes_2BL_9CD6E043A Triticum aestivum Traes_2BL_9CD6E043A I
ONIVA11G08160 Oryza nivara ONIVA11G08160 I
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I
TRIUR3_32168 Triticum urartu TRIUR3_32168 I
TRIUR3_32331 Triticum urartu TRIUR3_32331 I
Carubv10012215m.g Capsella rubella Carubv10012215m.g I
Pavir.J22217 Panicum virgatum Pavir.J22217 I
Pavir.J26137 Panicum virgatum Pavir.J26137 I
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I
BGIOSGA034227 Oryza indica BGIOSGA034227 I
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I
F775_17299 Aegilops tauschii F775_17299 I
OB11G16300 Oryza brachyantha OB11G16300 I
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I
MLOC_55144 Hordeum vulgare MLOC_55144 I
LPERR11G07100 Leersia perrieri LPERR11G07100 I
Sb04g022943 Sorghum bicolor Sb04g022943 N
BGIOSGA006249 Oryza indica BGIOSGA006249 N
BRADI3G45997 Brachypodium distachyon BRADI3G45997 N
GRMZM2G087040 Zea mays GRMZM2G087040 N
GRMZM2G139740 Zea mays GRMZM2G139740 N
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N
LPERR02G16700 Leersia perrieri LPERR02G16700 N
LPERR04G10650 Leersia perrieri LPERR04G10650 N
OMERI04G12360 Oryza meridionalis OMERI04G12360 N
OB02G28310 Oryza brachyantha OB02G28310 N
ORUFI04G15010 Oryza rufipogon ORUFI04G15010 N
ORUFI02G21740 Oryza rufipogon ORUFI02G21740 N
ORGLA04G0108200 Oryza glaberrima ORGLA04G0108200 N
OGLUM02G20980 Oryza glumaepatula OGLUM02G20980 N
OPUNC04G11630 Oryza punctata OPUNC04G11630 N
OPUNC02G18630 Oryza punctata OPUNC02G18630 N
ONIVA04G11950 Oryza nivara ONIVA04G11950 N
ONIVA02G22690 Oryza nivara ONIVA02G22690 N
OMERI02G20440 Oryza meridionalis OMERI02G20440 N