Ocbimv22004458m.g (Octopus bimaculoides)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 Ocbimv22004458m.g T341186_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.835 0.797
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.835 0.797
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.835 0.797
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.835 0.797
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.835 0.797
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.835 0.797
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.835 0.797
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.835 0.797
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.835 0.797
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.835 0.797
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.835 0.797
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.835 0.797
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.835 0.797
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.835 0.797
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.835 0.797
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.835 0.797
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.835 0.797
mid
M03994_2.00 		Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH		 SELEX
Nitta et al.(2015)
mid_1 		0.771 0.720
XP_001195863
M02498_2.00 		Strongylocentrotus purpuratus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2014)
pTH9340 		0.759 0.632
Eomes
M00215_2.00 		Mus musculus
RDGTGYBANN
NNTVRCACHY		 PBM
Badis et al.(2009)
Eomes_0921 		0.736 0.489
EOMES
M03563_2.00 		Homo sapiens
DAGGTGTGAWNNN
NNNWTCACACCTH		 SELEX
Jolma et al.(2013)
EOMES_1 		0.736 0.484
EOMES
M03564_2.00 		Homo sapiens
TVACACNTNNNDRNGTGTGA
TCACACNYHNNNANGTGTBA		 SELEX
Jolma et al.(2013)
EOMES_2 		0.736 0.484
EOMES
M02752_2.00 		Homo sapiens
AGGTGTGAW
WTCACACCT		 SELEX
Jolma et al.(2010)
EOMES_monomer 		0.736 0.484
EOMES
M05807_2.00 		Homo sapiens
DAGGTGTGAN
NTCACACCTH		 SELEX
Yin et al.(2017)
EOMES_eDBD_HT-SELEX 		0.736 0.484
EOMES
M09647_2.00 		Homo sapiens
ARGTGWKAAN
NTTMWCACYT		 Misc
Heinz et al.(2010)
H9-Eomes_GSE26097 		0.736 0.484
EOMES
M05808_2.00 		Homo sapiens
NABGTGYKAH
DTMRCACVTN		 SELEX
Yin et al.(2017)
EOMES_eDBD_Methyl-HT-SELEX 		0.736 0.484
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22004458m.p T-box 47 236
Ocbimv22004459m.p T-box 47 236

Links

Other T-box family TFs
Other Octopus bimaculoides TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EOMES Homo sapiens ENSG00000163508 D 0.736
TBX20 Homo sapiens ENSG00000164532 D 0.835
Tbx20 Mus musculus ENSMUSG00000031965 D 0.835
Eomes Mus musculus ENSMUSG00000032446 D 0.736
mid Drosophila melanogaster FBgn0261963 D 0.771
XP_001195863 Strongylocentrotus purpuratus XP_001195863 D 0.759
AAEL008337 Aedes aegypti AAEL008337 I 0.797
ACYPI008613 Acyrthosiphon pisum ACYPI008613 I 0.797
ADAC004417 Anopheles darlingi ADAC004417 I 0.789
AGAP008563 Anopheles gambiae AGAP008563 I 0.788
AGAP008567 Anopheles gambiae AGAP008567 I 0.789
AGAP008569 Anopheles gambiae AGAP008569 I 0.795
CBG07058 Caenorhabditis briggsae CBG07058 I 0.743
CBG24273 Caenorhabditis briggsae CBG24273 I 0.743
CBN11476 Caenorhabditis brenneri CBN11476 I 0.743
CGI_10005914 Crassostrea gigas CGI_10005914 I 0.740
CGI_10020437 Crassostrea gigas CGI_10020437 I 0.878
CJA32610 Caenorhabditis japonica CJA32610 I 0.744
CRE18119 Caenorhabditis remanei CRE18119 I 0.743
DAPPUDRAFT_59354 Daphnia pulex DAPPUDRAFT_59354 I 0.794
DAPPUDRAFT_59366 Daphnia pulex DAPPUDRAFT_59366 I 0.813
TBX20 Anolis carolinensis ENSACAG00000007473 I 0.835
EOMES Anolis carolinensis ENSACAG00000014201 I 0.744
ENSAMEG00000012731 Ailuropoda melanoleuca ENSAMEG00000012731 I 0.736
ENSAMXG00000002328 Astyanax mexicanus ENSAMXG00000002328 I 0.838
ENSAMXG00000010492 Astyanax mexicanus ENSAMXG00000010492 I 0.757
EOMES Bos taurus ENSBTAG00000016920 I 0.736
TBX20 Bos taurus ENSBTAG00000017541 I 0.833
EOMES Canis familiaris ENSCAFG00000005510 I 0.736
TBX20 Canis familiaris ENSCAFG00000028536 I 0.838
tbx20 Ciona intestinalis ENSCING00000005267 I 0.810
EOMES Callithrix jacchus ENSCJAG00000004263 I 0.736
TBX20 Callithrix jacchus ENSCJAG00000012232 I 0.835
EOMES Cavia porcellus ENSCPOG00000004381 I 0.736
TBX20 Cavia porcellus ENSCPOG00000015229 I 0.835
ENSCSAG00000014936 Chlorocebus sabaeus ENSCSAG00000014936 I 0.835
tbx21 Danio rerio ENSDARG00000004473 I 0.756
tbx20 Danio rerio ENSDARG00000005150 I 0.830
eomesb Danio rerio ENSDARG00000104243 I 0.736
TBX20 Dasypus novemcinctus ENSDNOG00000004142 I 0.835
Eomes Dipodomys ordii ENSDORG00000016346 I 0.736
TBX20 Equus caballus ENSECAG00000018182 I 0.835
EOMES Equus caballus ENSECAG00000021052 I 0.736
EOMES Erinaceus europaeus ENSEEUG00000005958 I 0.736
TBX20 Erinaceus europaeus ENSEEUG00000010135 I 0.835
TBX20 Echinops telfairi ENSETEG00000012771 I 0.835
ENSFALG00000002727 Ficedula albicollis ENSFALG00000002727 I 0.833
ENSFALG00000009181 Ficedula albicollis ENSFALG00000009181 I 0.744
EOMES Felis catus ENSFCAG00000003602 I 0.736
TBX20 Felis catus ENSFCAG00000013004 I 0.835
tbx20 Gasterosteus aculeatus ENSGACG00000012706 I 0.828
ENSGALG00000012151 Gallus gallus ENSGALG00000012151 I 0.835
EOMES Gallus gallus ENSGALG00000027247 I 0.744
EOMES Gorilla gorilla ENSGGOG00000008358 I 0.736
TBX20 Gorilla gorilla ENSGGOG00000026618 I 0.835
ENSGMOG00000012734 Gadus morhua ENSGMOG00000012734 I 0.830
ENSLACG00000010741 Latimeria chalumnae ENSLACG00000010741 I 0.826
EOMES Loxodonta africana ENSLAFG00000004142 I 0.736
TBX20 Loxodonta africana ENSLAFG00000012790 I 0.835
ENSLOCG00000002398 Lepisosteus oculatus ENSLOCG00000002398 I 0.743
ENSLOCG00000002483 Lepisosteus oculatus ENSLOCG00000002483 I 0.830
ENSLOCG00000016254 Lepisosteus oculatus ENSLOCG00000016254 I 0.736
TBX20 Meleagris gallopavo ENSMGAG00000012040 I 0.835
ENSMICG00000015729 Microcebus murinus ENSMICG00000015729 I 0.736
EOMES Myotis lucifugus ENSMLUG00000001462 I 0.736
TBX20 Myotis lucifugus ENSMLUG00000015517 I 0.835
ENSMMUG00000001904 Macaca mulatta ENSMMUG00000001904 I 0.736
TBX20 Macaca mulatta ENSMMUG00000012549 I 0.835
TBX20 Monodelphis domestica ENSMODG00000000085 I 0.835
ENSMODG00000012526 Monodelphis domestica ENSMODG00000012526 I 0.740
ENSMPUG00000007865 Mustela putorius furo ENSMPUG00000007865 I 0.835
ENSMPUG00000011981 Mustela putorius furo ENSMPUG00000011981 I 0.736
ENSNLEG00000001606 Nomascus leucogenys ENSNLEG00000001606 I 0.835
ENSNLEG00000004050 Nomascus leucogenys ENSNLEG00000004050 I 0.736
ENSOANG00000006968 Ornithorhynchus anatinus ENSOANG00000006968 I 0.835
ENSOARG00000005153 Ovis aries ENSOARG00000005153 I 0.833
ENSOARG00000014467 Ovis aries ENSOARG00000014467 I 0.736
ENSOCUG00000000451 Oryctolagus cuniculus ENSOCUG00000000451 I 0.736
TBX20 Oryctolagus cuniculus ENSOCUG00000007422 I 0.835
TBX20 Otolemur garnettii ENSOGAG00000010338 I 0.835
EOMES Otolemur garnettii ENSOGAG00000030966 I 0.736
ENSONIG00000006593 Oreochromis niloticus ENSONIG00000006593 I 0.828
ENSONIG00000007180 Oreochromis niloticus ENSONIG00000007180 I 0.743
ENSONIG00000018223 Oreochromis niloticus ENSONIG00000018223 I 0.757
TBX20 Ochotona princeps ENSOPRG00000013626 I 0.835
eomesb Oryzias latipes ENSORLG00000005393 I 0.743
ENSPANG00000007074 Papio anubis ENSPANG00000007074 I 0.835
ENSPANG00000011539 Papio anubis ENSPANG00000011539 I 0.736
EOMES Procavia capensis ENSPCAG00000013650 I 0.736
ENSPFOG00000012859 Poecilia formosa ENSPFOG00000012859 I 0.828
ENSPFOG00000017938 Poecilia formosa ENSPFOG00000017938 I 0.743
ENSPFOG00000018019 Poecilia formosa ENSPFOG00000018019 I 0.757
ENSPMAG00000003745 Petromyzon marinus ENSPMAG00000003745 I 0.735
ENSPPYG00000014055 Pongo abelii ENSPPYG00000014055 I 0.736
ENSPPYG00000017641 Pongo abelii ENSPPYG00000017641 I 0.835
ENSPSIG00000005360 Pelodiscus sinensis ENSPSIG00000005360 I 0.744
ENSPSIG00000016149 Pelodiscus sinensis ENSPSIG00000016149 I 0.835
EOMES Pan troglodytes ENSPTRG00000014705 I 0.736
TBX20 Pan troglodytes ENSPTRG00000019076 I 0.835
Tbx20 Rattus norvegicus ENSRNOG00000016181 I 0.835
ENSSHAG00000016356 Sarcophilus harrisii ENSSHAG00000016356 I 0.835
ENSSHAG00000017378 Sarcophilus harrisii ENSSHAG00000017378 I 0.736
ENSSHAG00000018315 Sarcophilus harrisii ENSSHAG00000018315 I 0.740
ENSSSCG00000011219 Sus scrofa ENSSSCG00000011219 I 0.736
TBX20 Sus scrofa ENSSSCG00000016662 I 0.833
ENSSSCG00000022626 Sus scrofa ENSSSCG00000022626 I 0.736
ENSSTOG00000020918 Ictidomys tridecemlineatus ENSSTOG00000020918 I 0.736
TBX20 Taeniopygia guttata ENSTGUG00000005375 I 0.835
tbx20 Tetraodon nigroviridis ENSTNIG00000005154 I 0.828
tbx21 Tetraodon nigroviridis ENSTNIG00000010103 I 0.757
eomesb Tetraodon nigroviridis ENSTNIG00000019116 I 0.743
tbx20 Takifugu rubripes ENSTRUG00000005667 I 0.828
eomesb Takifugu rubripes ENSTRUG00000008966 I 0.743
tbx21 Takifugu rubripes ENSTRUG00000012995 I 0.757
TBX20 Tursiops truncatus ENSTTRG00000016622 I 0.833
ENSXMAG00000004704 Xiphophorus maculatus ENSXMAG00000004704 I 0.828
ENSXMAG00000013655 Xiphophorus maculatus ENSXMAG00000013655 I 0.757
H15 Drosophila melanogaster FBgn0016660 I 0.783
GA19742 Drosophila pseudoobscura FBgn0079738 I 0.771
GF14390 Drosophila ananassae FBgn0091417 I 0.787
GF14392 Drosophila ananassae FBgn0091419 I 0.771
GG25071 Drosophila erecta FBgn0117200 I 0.783
GG25073 Drosophila erecta FBgn0117202 I 0.771
GI17985 Drosophila mojavensis FBgn0140725 I 0.787
GI17986 Drosophila mojavensis FBgn0140726 I 0.762
GL25841 Drosophila persimilis FBgn0163425 I 0.787
GM18547 Drosophila sechellia FBgn0173454 I 0.783
GM18548 Drosophila sechellia FBgn0173455 I 0.771
GD23340 Drosophila simulans FBgn0194726 I 0.783
GD23341 Drosophila simulans FBgn0194727 I 0.771
GJ19565 Drosophila virilis FBgn0206707 I 0.787
GJ19568 Drosophila virilis FBgn0206710 I 0.771
GK15084 Drosophila willistoni FBgn0217089 I 0.785
GK15086 Drosophila willistoni FBgn0217091 I 0.771
GE25406 Drosophila yakuba FBgn0242479 I 0.783
GE25417 Drosophila yakuba FBgn0242487 I 0.771
GA25466 Drosophila pseudoobscura FBgn0246844 I 0.787
GB45715 Apis mellifera GB45715 I 0.770
HelroG134299 Helobdella robusta HelroG134299 I 0.837
HelroG98030 Helobdella robusta HelroG98030 I 0.823
HMEL012426 Heliconius melpomene HMEL012426 I 0.812
L798_07505 Zootermopsis nevadensis L798_07505 I 0.817
LotgiG129083 Lottia gigantea LotgiG129083 I 0.776
LotgiG179359 Lottia gigantea LotgiG179359 I 0.807
NEMVEDRAFT_v1g117393 Nematostella vectensis NEMVEDRAFT_v1g117393 I 0.740
NEMVEDRAFT_v1g117456 Nematostella vectensis NEMVEDRAFT_v1g117456 I 0.760
NV17864 Nasonia vitripennis NV17864 I 0.775
NV17866 Nasonia vitripennis NV17866 I 0.766
SMAR008438 Strigamia maritima SMAR008438 I 0.838
SMAR015389 Strigamia maritima SMAR015389 I 0.809
Smp_003900 Schistosoma mansoni Smp_003900 I 0.802
TC014296 Tribolium castaneum TC014296 I 0.772
tetur32g01390 Tetranychus urticae tetur32g01390 I 0.779
tetur32g01430 Tetranychus urticae tetur32g01430 I 0.779
mab-9 Caenorhabditis elegans WBGene00003106 I 0.743
WBGene00247213 Onchocerca volvulus WBGene00247213 I 0.735
Alligator_sinensis_CCG014450.1 Alligator sinensis Alligator_sinensis_CCG014450.1 I 0.741
Cmyd_10006683 Chelonia mydas Cmyd_10006683 I 0.843
ENSP00000374205-D1 Bos grunniens ENSP00000374205-D1 I 0.735
ENSP00000386170-D1 Bos grunniens ENSP00000386170-D1 I 0.833
ENSP00000386170 Macaca fascicularis ENSP00000386170 I 0.835
ENSP00000388620 Macaca fascicularis ENSP00000388620 I 0.736
Myotis_brandtii_SLC4A10_10035570 Myotis brandtii Myotis_brandtii_SLC4A10_10035570 I 0.735
Myotis_brandtii_Tbx20_10020109 Myotis brandtii Myotis_brandtii_Tbx20_10020109 I 0.835
Ogr17175 Ophisaurus gracilis Ogr17175 I 0.744
Ogr18070 Ophisaurus gracilis Ogr18070 I 0.822
Pvit_04171 Pogona vitticeps Pvit_04171 I 0.835
e_gw.90.81.1 Branchiostoma floridae e_gw.90.81.1 I 0.784
Ocbimv22029974m.g Octopus bimaculoides Ocbimv22029974m.g I 0.737
Sakowv30012255m.g Saccoglossus kowalevskii Sakowv30012255m.g I 0.765
Sakowv30029504m.g Saccoglossus kowalevskii Sakowv30029504m.g I 0.839
LCUP000433 Lucilia cuprina LCUP000433 I 0.775
Sjc_0040480 Schistosoma japonicum Sjc_0040480 I 0.799
SMU15033270 Schmidtea mediterranea SMU15033270 I 0.826
eomes Xenopus tropicalis XB-GENE-479769 I 0.744
tbx20 Xenopus tropicalis XB-GENE-487334 I 0.828
eomes.S Xenopus laevis XB-GENE-6487182 I 0.744
tbx20.L Xenopus laevis XB-GENE-865696 I 0.828
AALB000416 Anopheles albimanus AALB000416 I 0.789
AARA011014 Anopheles arabiensis AARA011014 I 0.789
AATE013317 Anopheles atroparvus AATE013317 I 0.789
ACOM023916 Anopheles coluzzii ACOM023916 I 0.789
ACUA008697 Anopheles culicifacies ACUA008697 I 0.789
ADIR010890 Anopheles dirus ADIR010890 I 0.789
AEPI001842 Anopheles epiroticus AEPI001842 I 0.789
AFAF008895 Anopheles farauti AFAF008895 I 0.789
AFUN010568 Anopheles funestus AFUN010568 I 0.789
AMAM010638 Anopheles maculatus AMAM010638 I 0.789
AMEC012505 Anopheles melas AMEC012505 I 0.789
AMEC014683 Anopheles melas AMEC014683 I 0.789
AMEM005379 Anopheles merus AMEM005379 I 0.789
AMIN000992 Anopheles minimus AMIN000992 I 0.789
AQUA000256 Anopheles quadriannulatus AQUA000256 I 0.789
ASTEI05184 Anopheles stephensi ASTEI05184 I 0.789
ASTEI05186 Anopheles stephensi ASTEI05186 I 0.788
MDOA009961 Musca domestica MDOA009961 I 0.799
MDOA010319 Musca domestica MDOA010319 I 0.775
csin100383 Clonorchis sinensis csin100383 I 0.814
D915_09218 Fasciola hepatica D915_09218 I 0.826
ECANG7_07504 Echinococcus canadensis ECANG7_07504 I 0.797
EmuJ_000377200 Echinococcus multilocularis EmuJ_000377200 I 0.805
HCOI01255700 Haemonchus contortus HCOI01255700 I 0.750
HDID_0000627201 Hymenolepis diminuta HDID_0000627201 I 0.817
HmN_000695600 Hymenolepis microstoma HmN_000695600 I 0.817
HNAJ_0000047101 Hymenolepis nana HNAJ_0000047101 I 0.816
MCOS_0000012101 Mesocestoides corti MCOS_0000012101 I 0.802
T265_12717 Opisthorchis viverrini T265_12717 I 0.814
TASK_0000456901 Taenia asiatica TASK_0000456901 I 0.779