CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG12345
(
Caenorhabditis briggsae
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
CBG12345
T342188_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG12345
TBP
271
352
DIQIRNVVCNYTLPLHIDLRKLAMNTHNVTYEREKGVMMKQKRNPGCYIKVYSSGKVYIVGCRSEDDCRRAARSIARHVQRV
CBG12345
TBP
364
447
NYRVNNVLATCRLPFGIKIEEVAAKYPAESTYEPELSVGLVWRSTTPKATLRIHTTGSITVTGASSEADVLEVLSKIYPIVLDF
Links
Other
TBP
family TFs
Other
Caenorhabditis briggsae
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DICVIV_11308
Dictyocaulus viviparus
DICVIV_11308
N
0.727
TCNE_0000853601
Toxocara canis
TCNE_0000853601
N
0.709
TCLT_0000474901
Thelazia callipaeda
TCLT_0000474901
N
0.715
scaffold259-EXSNAP2012.8
Pristionchus exspectatus
scaffold259-EXSNAP2012.8
N
0.733
OFLC_0000425901
Onchocerca flexuosa
OFLC_0000425901
N
0.706
OESDEN_02210
Oesophagostomum dentatum
OESDEN_02210
N
0.764
nLs.2.1.2.g03126
Litomosoides sigmodontis
nLs.2.1.2.g03126
N
0.709
nDi.2.2.2.g05314
Dirofilaria immitis
nDi.2.2.2.g05314
N
0.703
HPBE_0000675601
Heligmosomoides bakeri
HPBE_0000675601
N
0.739
HCOI00597600
Haemonchus contortus
HCOI00597600
N
0.752
EEL_0000453801
Elaeophora elaphi
EEL_0000453801
N
0.703
DME_0000578001
Dracunculus medinensis
DME_0000578001
N
0.703
WUBG_01280
Wuchereria bancrofti
WUBG_01280
N
0.709
ASU_03242
Ascaris suum
ASU_03242
N
0.727
ASIM_0001210001
Anisakis simplex
ASIM_0001210001
N
0.709
ALUE_0000981201
Ascaris lumbricoides
ALUE_0000981201
N
0.727
ACOC_0000165301
Angiostrongylus costaricensis
ACOC_0000165301
N
0.758
tlf-1
Caenorhabditis elegans
WBGene00006577
N
0.958
Ppa-tlf-1
Pristionchus pacificus
PPA12059
N
0.733
LOAG_02128
Loa loa
LOAG_02128
N
0.709
CRE29744
Caenorhabditis remanei
CRE29744
N
0.945
CJA31001
Caenorhabditis japonica
CJA31001
N
0.881
CJA12630
Caenorhabditis japonica
CJA12630
N
0.921
Bm3947
Brugia malayi
Bm3947
N
0.715