TTHERM_01049270 (Tetrahymena thermophila)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 TTHERM_01049270 T345877_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.653
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.653
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.653
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.653
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.653
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.653
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.640
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.640
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.627
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.627
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.600
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.600
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.587
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.587
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.587
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.587
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.587
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.560
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.560
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.547
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.533
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.533
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.520
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.520
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.520
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.520
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.507
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.467
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EAS05277 TCR/CxC 530 566
EAS05277 TCR/CxC 614 651

Links

Other TCR/CxC family TFs
Other Tetrahymena thermophila TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA09G07960 Glycine max GLYMA09G07960 I
GLYMA15G18970 Glycine max GLYMA15G18970 I
GLYMA16G00711 Glycine max GLYMA16G00711 I
GLYMA17G05920 Glycine max GLYMA17G05920 I
MTR_8g019540 Medicago truncatula MTR_8g019540 I
Sb04g034760 Sorghum bicolor Sb04g034760 I
TCM_024732 Theobroma cacao TCM_024732 I
Cla015490 Citrullus lanatus Cla015490 I
cassava38260.valid.m1 Manihot esculenta cassava38260.valid.m1 I
Cucsa.127910 Cucumis sativus Cucsa.127910 I
Gorai.002G151800 Gossypium raimondii Gorai.002G151800 I
Gorai.003G093300 Gossypium raimondii Gorai.003G093300 I
Gorai.013G226200 Gossypium raimondii Gorai.013G226200 I
Pavir.Aa00318 Panicum virgatum Pavir.Aa00318 I
Pavir.J00945 Panicum virgatum Pavir.J00945 I
PK21261.1 Cannabis sativa PK21261.1 I
AMTR_s00155p00071520 Amborella trichopoda AMTR_s00155p00071520 N
UNE8 Arabidopsis thaliana AT3G05690 N
NFYA10 Arabidopsis thaliana AT5G06510 N
Bo1g150420 Brassica oleracea Bo1g150420 N
Bo3g060160 Brassica oleracea Bo3g060160 N
Bo5g145140 Brassica oleracea Bo5g145140 N
Bo9g176100 Brassica oleracea Bo9g176100 N
Bra001164 Brassica rapa Bra001164 N
Bra009200 Brassica rapa Bra009200 N
Bra040529 Brassica rapa Bra040529 N
UNE8 Arabidopsis lyrata fgenesh2_kg.3__563__AT3G05690.1 N
GLYMA02G35190 Glycine max GLYMA02G35190 N
GLYMA03G36140 Glycine max GLYMA03G36140 N
GLYMA09G02770 Glycine max GLYMA09G02770 N
GLYMA10G10240 Glycine max GLYMA10G10240 N
GLYMA13G16770 Glycine max GLYMA13G16770 N
GLYMA15G13660 Glycine max GLYMA15G13660 N
GLYMA19G38800 Glycine max GLYMA19G38800 N
GRMZM5G857944 Zea mays GRMZM5G857944 N
GSMUA_Achr7G01070_001 Musa acuminata GSMUA_Achr7G01070_001 N
GSMUA_Achr7G07860_001 Musa acuminata GSMUA_Achr7G07860_001 N
MTR_1g056530 Medicago truncatula MTR_1g056530 N
MTR_2g030170 Medicago truncatula MTR_2g030170 N
MTR_2g041090 Medicago truncatula MTR_2g041090 N
MTR_7g106450 Medicago truncatula MTR_7g106450 N
PGSC0003DMG400000272 Solanum tuberosum PGSC0003DMG400000272 N
POPTR_0006s14740 Populus trichocarpa POPTR_0006s14740 N
POPTR_0006s21640 Populus trichocarpa POPTR_0006s21640 N
POPTR_0016s06860 Populus trichocarpa POPTR_0016s06860 N
POPTR_0018s07220 Populus trichocarpa POPTR_0018s07220 N
PRUPE_ppa012173mg Prunus persica PRUPE_ppa012173mg N
PRUPE_ppa016008mg Prunus persica PRUPE_ppa016008mg N
PRUPE_ppa017366mg Prunus persica PRUPE_ppa017366mg N
NF-YA10 Arabidopsis lyrata scaffold_600636.1 N
Si019645m.g Setaria italica Si019645m.g N
Solyc12g009050.1 Solanum lycopersicum Solyc12g009050.1 N
TCM_022984 Theobroma cacao TCM_022984 N
TCM_037576 Theobroma cacao TCM_037576 N
VIT_06s0004g02270 Vitis vinifera VIT_06s0004g02270 N
VIT_08s0032g01190 Vitis vinifera VIT_08s0032g01190 N
VIT_11s0016g01480 Vitis vinifera VIT_11s0016g01480 N
Ca_00866 Cicer arietinum Ca_00866 N
Ca_10039 Cicer arietinum Ca_10039 N
Ca_11593 Cicer arietinum Ca_11593 N
Ca_14455 Cicer arietinum Ca_14455 N
Ca_20250 Cicer arietinum Ca_20250 N
Cla017115 Citrullus lanatus Cla017115 N
Cla017884 Citrullus lanatus Cla017884 N
Pm016266 Prunus mume Pm016266 N
Pm026038 Prunus mume Pm026038 N
Pm027028 Prunus mume Pm027028 N
29333.m001059 Ricinus communis 29333.m001059 N
29912.m005288 Ricinus communis 29912.m005288 N
cassava24247.valid.m1 Manihot esculenta cassava24247.valid.m1 N
cassava41983.valid.m1 Manihot esculenta cassava41983.valid.m1 N
Cucsa.241980 Cucumis sativus Cucsa.241980 N
mgf023644m Mimulus guttatus mgf023644m N
mgf025421m Mimulus guttatus mgf025421m N
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N
Aquca_026_00359 Aquilegia coerulea Aquca_026_00359 N
Bostr.13129s0320 Boechera stricta Bostr.13129s0320 N
Bostr.2570s0105 Boechera stricta Bostr.2570s0105 N
Cagra.2117s0012 Capsella grandiflora Cagra.2117s0012 N
Carubv10001713m.g Capsella rubella Carubv10001713m.g N
Carubv10014086m.g Capsella rubella Carubv10014086m.g N
Ciclev10012232m.g Citrus clementina Ciclev10012232m.g N
Eucgr.C00842 Eucalyptus grandis Eucgr.C00842 N
evm.TU.supercontig_104.9 Carica papaya evm.TU.supercontig_104.9 N
gene12709-v1.0-hybrid Fragaria vesca gene12709-v1.0-hybrid N
gene18295-v1.0-hybrid Fragaria vesca gene18295-v1.0-hybrid N
Gorai.002G234400 Gossypium raimondii Gorai.002G234400 N
Gorai.007G363800 Gossypium raimondii Gorai.007G363800 N
Gorai.009G115000 Gossypium raimondii Gorai.009G115000 N
Lus10013592.g Linum usitatissimum Lus10013592.g N
Lus10021259.g Linum usitatissimum Lus10021259.g N
MDP0000129029 Malus domestica MDP0000129029 N
MDP0000223651 Malus domestica MDP0000223651 N
MDP0000279028 Malus domestica MDP0000279028 N
MDP0000375005 Malus domestica MDP0000375005 N
MDP0000506954 Malus domestica MDP0000506954 N
MDP0000588222 Malus domestica MDP0000588222 N
MDP0000785523 Malus domestica MDP0000785523 N
MDP0000827821 Malus domestica MDP0000827821 N
MDP0000948645 Malus domestica MDP0000948645 N
orange1.1g021081m.g Citrus sinensis orange1.1g021081m.g N
SapurV1A.0087s0010 Salix purpurea SapurV1A.0087s0010 N
SapurV1A.0258s0010 Salix purpurea SapurV1A.0258s0010 N
SapurV1A.0980s0030 Salix purpurea SapurV1A.0980s0030 N
SapurV1A.1209s0040 Salix purpurea SapurV1A.1209s0040 N
SapurV1A.1588s0020 Salix purpurea SapurV1A.1588s0020 N
Thhalv10014346m.g Eutrema salsugineum Thhalv10014346m.g N
Thhalv10021244m.g Eutrema salsugineum Thhalv10021244m.g N
PK20005.1 Cannabis sativa PK20005.1 N
PK26326.1 Cannabis sativa PK26326.1 N
chr1.CM0361.430.nc Lotus japonicus chr1.CM0361.430.nc N
chr5.CM0571.20.nd Lotus japonicus chr5.CM0571.20.nd N