ATWHY2 (Populus trichocarpa)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08536 (Whirly) IPR013742 POPTR_0003s04700 T350553_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s04700.1 Whirly 54 165

Links

Other Whirly family TFs
Other Populus trichocarpa TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.237770 Cucumis sativus Cucsa.237770 N 0.714
chr1.LjT14G19.90.nc Lotus japonicus chr1.LjT14G19.90.nc N 0.768
PK20247.1 Cannabis sativa PK20247.1 N 0.714
Thhalv10019058m.g Eutrema salsugineum Thhalv10019058m.g N 0.777
SapurV1A.0002s0060 Salix purpurea SapurV1A.0002s0060 N 0.929
MDP0000168614 Malus domestica MDP0000168614 N 0.786
Lus10035067.g Linum usitatissimum Lus10035067.g N 0.750
Lus10017892.g Linum usitatissimum Lus10017892.g N 0.750
Eucgr.K01091 Eucalyptus grandis Eucgr.K01091 N 0.795
Carubv10020880m.g Capsella rubella Carubv10020880m.g N 0.795
Bostr.10273s0220 Boechera stricta Bostr.10273s0220 N 0.750
mgf015710m Mimulus guttatus mgf015710m N 0.777
WHY2 Arabidopsis thaliana AT1G71260 N 0.786
cassava9653.m1 Manihot esculenta cassava9653.m1 N 0.812
cassava24783.valid.m1 Manihot esculenta cassava24783.valid.m1 N 0.795
Pm022821 Prunus mume Pm022821 N 0.768
TCM_035992 Theobroma cacao TCM_035992 N 0.705
ATWHY2 Arabidopsis lyrata scaffold_202038.1 N 0.795
PRUPE_ppa011529mg Prunus persica PRUPE_ppa011529mg N 0.777
GLYMA19G43880 Glycine max GLYMA19G43880 N 0.723
GLYMA03G41270 Glycine max GLYMA03G41270 N 0.705
Bra016150 Brassica rapa Bra016150 N 0.732
Bo6g112840 Brassica oleracea Bo6g112840 N 0.723