CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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30068.m002588
(
Ricinus communis
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08879 (WRC)
IPR014977
30068.m002588
T351428_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30068.m002588
WRC
193
235
PEPWRCKRTDGKKWRCSRDVAPDQKYCERHSHKSRPRSRKPVE
Links
Other
WRC
family TFs
Other
Ricinus communis
TFs
476 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANAC050
Arabidopsis thaliana
AT3G10480
D
0.000
Cagra.0834s0029
Capsella grandiflora
Cagra.0834s0029
I
0.000
Cagra.9217s0020
Capsella grandiflora
Cagra.9217s0020
I
0.000
Cagra.0834s0028
Capsella grandiflora
Cagra.0834s0028
I
0.000
Bostr.22252s0012
Boechera stricta
Bostr.22252s0012
I
0.000
Bostr.22252s0011
Boechera stricta
Bostr.22252s0011
I
0.000
mgf020265m
Mimulus guttatus
mgf020265m
I
0.000
mgf004743m
Mimulus guttatus
mgf004743m
I
0.000
mgf000623m
Mimulus guttatus
mgf000623m
I
0.000
Cucsa.308760
Cucumis sativus
Cucsa.308760
I
0.000
cassava22912.valid.m1
Manihot esculenta
cassava22912.valid.m1
I
0.000
Pm017547
Prunus mume
Pm017547
I
0.000
Cla020838
Citrullus lanatus
Cla020838
I
0.000
Ca_08371
Cicer arietinum
Ca_08371
I
0.000
VIT_13s0019g05240
Vitis vinifera
VIT_13s0019g05240
I
0.000
VIT_13s0019g05230
Vitis vinifera
VIT_13s0019g05230
I
0.000
TRIUR3_33524
Triticum urartu
TRIUR3_33524
I
0.000
Traes_7DS_9FBF54244
Triticum aestivum
Traes_7DS_9FBF54244
I
0.000
Traes_7BL_FB5FAC1E8
Triticum aestivum
Traes_7BL_FB5FAC1E8
I
0.000
Traes_6AL_8BA1FF8B2
Triticum aestivum
Traes_6AL_8BA1FF8B2
I
0.000
TCM_043357
Theobroma cacao
TCM_043357
I
0.000
Solyc11g008000.1
Solanum lycopersicum
Solyc11g008000.1
I
0.000
Solyc05g055480.2
Solanum lycopersicum
Solyc05g055480.2
I
0.000
Solyc05g055470.2
Solanum lycopersicum
Solyc05g055470.2
I
0.000
Si016620m.g
Setaria italica
Si016620m.g
I
0.000
Lus10038670.g
Linum usitatissimum
Lus10038670.g
I
0.000
chr5.CM0909.750.nc
Lotus japonicus
chr5.CM0909.750.nc
I
0.000
PK06477.1
Cannabis sativa
PK06477.1
I
0.000
Thhalv10020745m.g
Eutrema salsugineum
Thhalv10020745m.g
I
0.000
Thhalv10020717m.g
Eutrema salsugineum
Thhalv10020717m.g
I
0.000
SapurV1A.0213s0310
Salix purpurea
SapurV1A.0213s0310
I
0.000
Pavir.Fb02407
Panicum virgatum
Pavir.Fb02407
I
0.000
Pavir.Fa00048
Panicum virgatum
Pavir.Fa00048
I
0.000
Pavir.Ab03009
Panicum virgatum
Pavir.Ab03009
I
0.000
Pavir.Aa00085
Panicum virgatum
Pavir.Aa00085
I
0.000
orange1.1g014130m.g
Citrus sinensis
orange1.1g014130m.g
I
0.000
MDP0000437676
Malus domestica
MDP0000437676
I
0.000
MDP0000258167
Malus domestica
MDP0000258167
I
0.000
Si013361m.g
Setaria italica
Si013361m.g
I
0.000
Lus10037939.g
Linum usitatissimum
Lus10037939.g
I
0.000
Lus10023537.g
Linum usitatissimum
Lus10023537.g
I
0.000
Gorai.012G007000
Gossypium raimondii
Gorai.012G007000
I
0.000
Gorai.011G234200
Gossypium raimondii
Gorai.011G234200
I
0.000
Gorai.009G309300
Gossypium raimondii
Gorai.009G309300
I
0.000
gene23561-v1.0-hybrid
Fragaria vesca
gene23561-v1.0-hybrid
I
0.000
Eucgr.J01038
Eucalyptus grandis
Eucgr.J01038
I
0.000
Ciclev10031606m.g
Citrus clementina
Ciclev10031606m.g
I
0.000
Carubv10013694m.g
Capsella rubella
Carubv10013694m.g
I
0.000
Carubv10013564m.g
Capsella rubella
Carubv10013564m.g
I
0.000
Carubv10003768m.g
Capsella rubella
Carubv10003768m.g
I
0.000
Bra029844
Brassica rapa
Bra029844
I
0.000
GRMZM2G125777
Zea mays
GRMZM2G125777
I
0.000
GRMZM2G113950
Zea mays
GRMZM2G113950
I
0.000
GLYMA20G33430
Glycine max
GLYMA20G33430
I
0.000
GLYMA10G34130
Glycine max
GLYMA10G34130
I
0.000
ANAC052
Arabidopsis lyrata
fgenesh2_kg.3__1083__AT3G10490.2
I
0.000
ANAC050
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_3000864
I
0.000
F775_27564
Aegilops tauschii
F775_27564
I
0.000
BRADI3G56080
Brachypodium distachyon
BRADI3G56080
I
0.000
BRADI3G12470
Brachypodium distachyon
BRADI3G12470
I
0.000
Bra034119
Brassica rapa
Bra034119
I
0.000
Bra034118
Brassica rapa
Bra034118
I
0.000
LPERR08G20450
Leersia perrieri
LPERR08G20450
I
0.000
Bra008980
Brassica rapa
Bra008980
I
0.000
Bra001366
Brassica rapa
Bra001366
I
0.000
Bra001365
Brassica rapa
Bra001365
I
0.000
Bo5g137360
Brassica oleracea
Bo5g137360
I
0.000
Bo3g062710
Brassica oleracea
Bo3g062710
I
0.000
Bo3g062700
Brassica oleracea
Bo3g062700
I
0.000
Bo1g143850
Brassica oleracea
Bo1g143850
I
0.000
Bo1g143840
Brassica oleracea
Bo1g143840
I
0.000
BGIOSGA026481
Oryza indica
BGIOSGA026481
I
0.000
BGIOSGA009316
Oryza indica
BGIOSGA009316
I
0.000
ANAC052
Arabidopsis thaliana
AT3G10490
I
0.000
OPUNC02G34910
Oryza punctata
OPUNC02G34910
I
0.000
Sb04g037720
Sorghum bicolor
Sb04g037720
I
0.000
POPTR_0010s23630
Populus trichocarpa
POPTR_0010s23630
I
0.000
PGSC0003DMG402023373
Solanum tuberosum
PGSC0003DMG402023373
I
0.000
PGSC0003DMG401023373
Solanum tuberosum
PGSC0003DMG401023373
I
0.000
OS08G0562200
Oryza sativa
OS08G0562200
I
0.000
OS02G0822400
Oryza sativa
OS02G0822400
I
0.000
ORUFI08G26250
Oryza rufipogon
ORUFI08G26250
I
0.000
ORUFI02G39260
Oryza rufipogon
ORUFI02G39260
I
0.000
ORGLA08G0191600
Oryza glaberrima
ORGLA08G0191600
I
0.000
ORGLA02G0329400
Oryza glaberrima
ORGLA02G0329400
I
0.000
OPUNC08G21700
Oryza punctata
OPUNC08G21700
I
0.000
Sb07g023900
Sorghum bicolor
Sb07g023900
I
0.000
ONIVA08G26810
Oryza nivara
ONIVA08G26810
I
0.000
ONIVA02G40500
Oryza nivara
ONIVA02G40500
I
0.000
OMERI08G18580
Oryza meridionalis
OMERI08G18580
I
0.000
OLONG_023179
Oryza longistaminata
OLONG_023179
I
0.000
OGLUM08G25240
Oryza glumaepatula
OGLUM08G25240
I
0.000
OGLUM02G38880
Oryza glumaepatula
OGLUM02G38880
I
0.000
OBART08G23760
Oryza barthii
OBART08G23760
I
0.000
OBART02G37700
Oryza barthii
OBART02G37700
I
0.000
OB08G30590
Oryza brachyantha
OB08G30590
I
0.000
OB02G44540
Oryza brachyantha
OB02G44540
I
0.000
MTR_1g090720
Medicago truncatula
MTR_1g090720
I
0.000