Pavir.J25248 (Panicum virgatum)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Pavir.J25248 T351743_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42040
M01088_2.00 		Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN		 PBM
Sullivan et al.(2014)
pTH7503 		0.810 0.810
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J25248.1.p WRC 176 217

Links

Other WRC family TFs
Other Panicum virgatum TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OESDEN_04341 Oesophagostomum dentatum OESDEN_04341 I 0.000
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.000
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.000
HCOI00592600 Haemonchus contortus HCOI00592600 I 0.000
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.000
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.000
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.000
L889_g17254 Steinernema feltiae L889_g17254 I 0.000
L893_g25227 Steinernema glaseri L893_g25227 I 0.000
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.000
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.000
NECAME_00872 Necator americanus NECAME_00872 I 0.000
EVEC_0001195701 Enterobius vermicularis EVEC_0001195701 I 0.000
PTRK_0000862000 Parastrongyloides trichosuri PTRK_0000862000 I 0.000
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.000
SMUV_0000369301 Syphacia muris SMUV_0000369301 I 0.000
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.000
SPAL_0001213800 Strongyloides papillosus SPAL_0001213800 I 0.000
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.000
SSTP_0001140400 Strongyloides stercoralis SSTP_0001140400 I 0.000
SSTP_0001170700 Strongyloides stercoralis SSTP_0001170700 I 0.000
SVE_0639400 Strongyloides venezuelensis SVE_0639400 I 0.000
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.000
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.000
CBG16594 Caenorhabditis briggsae CBG16594 I 0.000
CBG23318 Caenorhabditis briggsae CBG23318 I 0.000
CBG23319 Caenorhabditis briggsae CBG23319 I 0.000
CBN11572 Caenorhabditis brenneri CBN11572 I 0.000
CBN20518 Caenorhabditis brenneri CBN20518 I 0.000
CBN30215 Caenorhabditis brenneri CBN30215 I 0.000
CJA16040 Caenorhabditis japonica CJA16040 I 0.000
CJA37776 Caenorhabditis japonica CJA37776 I 0.000
CRE00809 Caenorhabditis remanei CRE00809 I 0.000
CRE25378 Caenorhabditis remanei CRE25378 I 0.000
CRE26982 Caenorhabditis remanei CRE26982 I 0.000
CBG14485 Caenorhabditis briggsae CBG14485 I 0.000
nhr-35 Caenorhabditis elegans WBGene00003628 I 0.000
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.000
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.000
Minc13747 Meloidogyne incognita Minc13747 I 0.000
Minc17538 Meloidogyne incognita Minc17538 I 0.000
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.000
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.000
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.000
ASU_12501 Ascaris suum ASU_12501 I 0.000
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.000