cassava25451.m1 (Manihot esculenta)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 cassava25451.m1 T355487_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.875 0.864
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.875 0.864
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.874 0.864
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.874 0.864
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.870 0.864
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.870 0.864
WRKY47
M00732_2.00 		Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN		 PBM
Chang et al.(2013)
pTH7913 		0.866 0.831
WRKY47
M07402_2.00 		Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW		 Dap-seq
OMalley et al.(2016)
WRKY47_col_a 		0.866 0.831
WRKY47
M07403_2.00 		Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a 		0.866 0.831
WRKY21
M02553_2.00 		Arabidopsis thaliana
NNRGTCAAMN
NKTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7422 		0.814 0.627
WRKY21
M07389_2.00 		Arabidopsis thaliana
HAAAGTCAACNNH
DNNGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a 		0.814 0.627
WRKY21
M07390_2.00 		Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_col 		0.814 0.627
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava25451.m1 WRKY 232 290

Links

Other WRKY family TFs
Other Manihot esculenta TFs

581 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OLONG_002280 Oryza longistaminata OLONG_002280 I
cassava34998.m1 Manihot esculenta cassava34998.m1 I
Cagra.0551s0003 Capsella grandiflora Cagra.0551s0003 I
SELMODRAFT_39481 Selaginella moellendorffii SELMODRAFT_39481 I
SELMODRAFT_39454 Selaginella moellendorffii SELMODRAFT_39454 I
Pavir.Ia03542 Panicum virgatum Pavir.Ia03542 I
PGSC0003DMG400006176 Solanum tuberosum PGSC0003DMG400006176 I
MLOC_69570 Hordeum vulgare MLOC_69570 I
GRMZM2G129872 Zea mays GRMZM2G129872 I
GRMZM2G124715 Zea mays GRMZM2G124715 I
GRMZM2G051256 Zea mays GRMZM2G051256 I
GRMZM2G016020 Zea mays GRMZM2G016020 I
GRMZM2G000818 Zea mays GRMZM2G000818 I
F775_04823 Aegilops tauschii F775_04823 I
CM0385.290.nd Lotus japonicus CM0385.290.nd I
POPTR_0017s10770 Populus trichocarpa POPTR_0017s10770 N
SapurV1A.0553s0120 Salix purpurea SapurV1A.0553s0120 N
MDP0000317257 Malus domestica MDP0000317257 N
Lus10000008.g Linum usitatissimum Lus10000008.g N
SapurV1A.3841s0010 Salix purpurea SapurV1A.3841s0010 N
mgf019239m Mimulus guttatus mgf019239m N
30225.m001697 Ricinus communis 30225.m001697 N
TRIUR3_23036 Triticum urartu TRIUR3_23036 N
SELMODRAFT_39507 Selaginella moellendorffii SELMODRAFT_39507 N
AMTR_s00048p00210040 Amborella trichopoda AMTR_s00048p00210040 N
POPTR_0002s15900 Populus trichocarpa POPTR_0002s15900 N
ORGLA12G0042500 Oryza glaberrima ORGLA12G0042500 N
BGIOSGA035676 Oryza indica BGIOSGA035676 N
BGIOSGA022508 Oryza indica BGIOSGA022508 N