OLONG_002280 (Oryza longistaminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OLONG_002280 T275862_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYBP_MAIZE
M11057_2.00 		Zea mays
ACCWACCHN
NDGGTWGGT		 Transfac
Matys et al.(2006)
P$P_01 		0.724 0.870
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_002280-R1 Myb 14 61
OLONG_002280-R1 Myb 67 88

Links

Other Myb/SANT family TFs
Other Oryza longistaminata TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ia03542 Panicum virgatum Pavir.Ia03542 I 0.843
GRMZM2G016020 Zea mays GRMZM2G016020 I 0.779
GRMZM2G129872 Zea mays GRMZM2G129872 I 0.779
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.769
BGIOSGA003347 Oryza indica BGIOSGA003347 I 0.762
cassava34998.m1 Manihot esculenta cassava34998.m1 I 0.762
MYBP_MAIZE Zea mays MYBP_MAIZE D 0.724
mgf024704m Mimulus guttatus mgf024704m N 0.717
30076.m004682 Ricinus communis 30076.m004682 I 0.710
Cagra.0551s0003 Capsella grandiflora Cagra.0551s0003 I 0.710
evm.TU.supercontig_18.16 Carica papaya evm.TU.supercontig_18.16 I 0.709
CM0385.290.nd Lotus japonicus CM0385.290.nd I 0.706
SapurV1A.3841s0010 Salix purpurea SapurV1A.3841s0010 N 0.687
SELMODRAFT_39507 Selaginella moellendorffii SELMODRAFT_39507 N 0.686
SELMODRAFT_39516 Selaginella moellendorffii SELMODRAFT_39516 N 0.686
SELMODRAFT_39454 Selaginella moellendorffii SELMODRAFT_39454 I 0.682
SELMODRAFT_39481 Selaginella moellendorffii SELMODRAFT_39481 I 0.682
29889.m003258 Ricinus communis 29889.m003258 I 0.677
Pavir.Ea01343 Panicum virgatum Pavir.Ea01343 I 0.671
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.670
OBART03G14380 Oryza barthii OBART03G14380 I 0.670
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.670
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.670
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.670
LjSGA_102038.1 Lotus japonicus LjSGA_102038.1 I 0.668
29816.m000664 Ricinus communis 29816.m000664 N 0.666
Ca_06925 Cicer arietinum Ca_06925 N 0.665
SapurV1A.0553s0120 Salix purpurea SapurV1A.0553s0120 N 0.664
Traes_4BL_F7B9CBA99 Triticum aestivum Traes_4BL_F7B9CBA99 N 0.663