VDBG_04249 (Verticillium albo atrum)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 VDBG_04249 T357992_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ff-7
M02603_2.00 		Neurospora crassa
VGCGSNN
NNSCGCB		 PBM
Weirauch et al.(2014)
pTH8817 		0.548 0.750
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_04249T0 Zinc cluster 234 273

Links

Other Zinc cluster family TFs
Other Verticillium albo atrum TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10019451m.g Eutrema salsugineum Thhalv10019451m.g I 0.000
Thhalv10024162m.g Eutrema salsugineum Thhalv10024162m.g I 0.000
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I 0.000
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I 0.000
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I 0.000
Thhalv10019833m.g Eutrema salsugineum Thhalv10019833m.g I 0.000
Thhalv10019810m.g Eutrema salsugineum Thhalv10019810m.g I 0.000
Thhalv10019751m.g Eutrema salsugineum Thhalv10019751m.g I 0.000
Thhalv10019731m.g Eutrema salsugineum Thhalv10019731m.g I 0.000
Thhalv10019681m.g Eutrema salsugineum Thhalv10019681m.g I 0.000
Thhalv10019579m.g Eutrema salsugineum Thhalv10019579m.g I 0.000
Thhalv10019516m.g Eutrema salsugineum Thhalv10019516m.g I 0.000
Bo9g078450 Brassica oleracea Bo9g078450 I 0.000
Thhalv10019449m.g Eutrema salsugineum Thhalv10019449m.g I 0.000
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I 0.000
Thhalv10002996m.g Eutrema salsugineum Thhalv10002996m.g I 0.000
Thhalv10002956m.g Eutrema salsugineum Thhalv10002956m.g I 0.000
Thhalv10002353m.g Eutrema salsugineum Thhalv10002353m.g I 0.000
Thhalv10002352m.g Eutrema salsugineum Thhalv10002352m.g I 0.000
Thhalv10002350m.g Eutrema salsugineum Thhalv10002350m.g I 0.000
Thhalv10002349m.g Eutrema salsugineum Thhalv10002349m.g I 0.000
Thhalv10002346m.g Eutrema salsugineum Thhalv10002346m.g I 0.000
mgf026186m Mimulus guttatus mgf026186m I 0.000
Bra041022 Brassica rapa Bra041022 I 0.000
Bra029469 Brassica rapa Bra029469 I 0.000
Thhalv10019667m.g Eutrema salsugineum Thhalv10019667m.g N 0.000
Thhalv10019758m.g Eutrema salsugineum Thhalv10019758m.g N 0.000