BRADI1G48320 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI1G48320 T001271_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-9
M06633_2.00 		Arabidopsis thaliana
NNNNNNNDBCACCGACMHH
DDKGTCGGTGVHNNNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR5_col_a 		0.768 0.880
RAP2-9
M06634_2.00 		Arabidopsis thaliana
NCACCGACMHH
DDKGTCGGTGN		 Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a 		0.768 0.880
ERF010
M06690_2.00 		Arabidopsis thaliana
HHNHHDYCACCGHCD
HGDCGGTGRHDDNDD		 Dap-seq
OMalley et al.(2016)
DEAR2_col_a 		0.763 0.880
ERF010
M06691_2.00 		Arabidopsis thaliana
NNNHDBCACCGACAH
DTGTCGGTGVHDNNN		 Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a 		0.763 0.880
RAP2-10
M00850_2.00 		Arabidopsis thaliana
NNRCCGHCNN
NNGDCGGYNN		 PBM
Franco-Zorrilla et al.(2014)
DEAR4 		0.762 0.880
ERF011
M06628_2.00 		Arabidopsis thaliana
YHNHHDYCACCGHCN
NGDCGGTGRHDDNDR		 Dap-seq
OMalley et al.(2016)
CEJ1_col_a 		0.762 0.840
ERF011
M06629_2.00 		Arabidopsis thaliana
NDNCACCGACMHH
DDKGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a 		0.762 0.840
ERF008
M00844_2.00 		Arabidopsis thaliana
SHRCCGHC
GDCGGYDS		 PBM
Franco-Zorrilla et al.(2014)
DEAR3 		0.752 0.860
ERF008
M01048_2.00 		Arabidopsis thaliana
CRCCGMCN
NGKCGGYG		 PBM
Sullivan et al.(2014)
pTH7672 		0.752 0.860
ERF008
M06602_2.00 		Arabidopsis thaliana
NNNNNBCACCGACAHHN
NDDTGTCGGTGVNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR3_col_a 		0.752 0.860
ERF008
M06603_2.00 		Arabidopsis thaliana
NNBCACCGACAWH
DWTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a 		0.752 0.860
RAP2-1
M06582_2.00 		Arabidopsis thaliana
NHDYCRCCGMCAH
DTGKCGGYGRHDN		 Dap-seq
OMalley et al.(2016)
RAP21_col_a 		0.716 0.820
RAP2-1
M06583_2.00 		Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN
NNNNNHDDTGTCGGTGVHDN		 Dap-seq
OMalley et al.(2016)
RAP21_colamp_a 		0.716 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G48320.1 AP2 42 93

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28718.m000038 Ricinus communis 28718.m000038 I 0.774
30170.m013843 Ricinus communis 30170.m013843 I 0.780
AMTR_s00051p00204250 Amborella trichopoda AMTR_s00051p00204250 I 0.721
Aquca_007_00717 Aquilegia coerulea Aquca_007_00717 I 0.782
Aquca_010_00625 Aquilegia coerulea Aquca_010_00625 I 0.780
BGIOSGA014220 Oryza indica BGIOSGA014220 I 0.799
BGIOSGA014221 Oryza indica BGIOSGA014221 I 0.799
BGIOSGA022380 Oryza indica BGIOSGA022380 I 0.815
Bo1g004940 Brassica oleracea Bo1g004940 I 0.752
Bo4g151460 Brassica oleracea Bo4g151460 I 0.762
Bo7g063980 Brassica oleracea Bo7g063980 I 0.763
Bo7g118430 Brassica oleracea Bo7g118430 I 0.762
Bo8g079660 Brassica oleracea Bo8g079660 I 0.763
Bo9g020380 Brassica oleracea Bo9g020380 I 0.757
Bostr.0568s0141 Boechera stricta Bostr.0568s0141 I 0.763
Bostr.12302s0138 Boechera stricta Bostr.12302s0138 I 0.762
Bostr.27895s0153 Boechera stricta Bostr.27895s0153 I 0.762
Bostr.3877s0058 Boechera stricta Bostr.3877s0058 I 0.748
Bostr.6864s0220 Boechera stricta Bostr.6864s0220 I 0.754
Bostr.7867s1581 Boechera stricta Bostr.7867s1581 I 0.762
Bra011744 Brassica rapa Bra011744 I 0.771
Bra012140 Brassica rapa Bra012140 I 0.742
Bra014056 Brassica rapa Bra014056 I 0.772
Bra017811 Brassica rapa Bra017811 I 0.762
Bra032173 Brassica rapa Bra032173 I 0.762
Bra036061 Brassica rapa Bra036061 I 0.763
Bra037124 Brassica rapa Bra037124 I 0.757
BRADI5G24110 Brachypodium distachyon BRADI5G24110 I 0.799
Cagra.0342s0005 Capsella grandiflora Cagra.0342s0005 I 0.763
Cagra.0706s0004 Capsella grandiflora Cagra.0706s0004 I 0.762
Cagra.1735s0005 Capsella grandiflora Cagra.1735s0005 I 0.762
Cagra.29993s0001 Capsella grandiflora Cagra.29993s0001 I 0.762
Cagra.4909s0050 Capsella grandiflora Cagra.4909s0050 I 0.762
Carubv10005767m.g Capsella rubella Carubv10005767m.g I 0.762
Carubv10010891m.g Capsella rubella Carubv10010891m.g I 0.762
Carubv10018162m.g Capsella rubella Carubv10018162m.g I 0.762
Carubv10024198m.g Capsella rubella Carubv10024198m.g I 0.762
Carubv10027999m.g Capsella rubella Carubv10027999m.g I 0.763
cassava17493.valid.m1 Manihot esculenta cassava17493.valid.m1 I 0.794
cassava47353.m1 Manihot esculenta cassava47353.m1 I 0.780
cassava9153.m1 Manihot esculenta cassava9153.m1 I 0.780
Ca_01556 Cicer arietinum Ca_01556 I 0.719
Ca_02170 Cicer arietinum Ca_02170 I 0.780
CEJ1 Arabidopsis lyrata fgenesh2_kg.5__1372__AT3G50260.1 I 0.762
Ciclev10002733m.g Citrus clementina Ciclev10002733m.g I 0.763
Ciclev10026687m.g Citrus clementina Ciclev10026687m.g I 0.775
Cla014175 Citrullus lanatus Cla014175 I 0.758
Cla020550 Citrullus lanatus Cla020550 I 0.755
Cla020961 Citrullus lanatus Cla020961 I 0.772
Cla022937 Citrullus lanatus Cla022937 I 0.766
Cucsa.102560 Cucumis sativus Cucsa.102560 I 0.758
Cucsa.352470 Cucumis sativus Cucsa.352470 I 0.772
Cucsa.367300 Cucumis sativus Cucsa.367300 I 0.755
Cucsa.395960 Cucumis sativus Cucsa.395960 I 0.766
DEAR2 Arabidopsis lyrata scaffold_803390.1 I 0.763
DEAR3 Arabidopsis lyrata fgenesh2_kg.4__264__AT2G23340.1 I 0.762
ERF008 Arabidopsis thaliana AT2G23340 D 0.752
ERF010 Arabidopsis thaliana AT5G67190 D 0.763
ERF011 Arabidopsis thaliana AT3G50260 D 0.762
Eucgr.F00192 Eucalyptus grandis Eucgr.F00192 I 0.770
Eucgr.F02317 Eucalyptus grandis Eucgr.F02317 I 0.772
Eucgr.F02319 Eucalyptus grandis Eucgr.F02319 I 0.772
Eucgr.H02094 Eucalyptus grandis Eucgr.H02094 I 0.775
gene09137-v1.0-hybrid Fragaria vesca gene09137-v1.0-hybrid I 0.766
gene23873-v1.0-hybrid Fragaria vesca gene23873-v1.0-hybrid I 0.774
GLYMA01G39540 Glycine max GLYMA01G39540 I 0.782
GLYMA04G04355 Glycine max GLYMA04G04355 I 0.760
GLYMA05G19050 Glycine max GLYMA05G19050 I 0.779
GLYMA06G04490 Glycine max GLYMA06G04490 I 0.760
GLYMA11G05700 Glycine max GLYMA11G05700 I 0.782
GLYMA14G09320 Glycine max GLYMA14G09320 I 0.772
GLYMA17G18580 Glycine max GLYMA17G18580 I 0.767
GLYMA17G35860 Glycine max GLYMA17G35860 I 0.766
Gorai.003G026100 Gossypium raimondii Gorai.003G026100 I 0.775
Gorai.003G099700 Gossypium raimondii Gorai.003G099700 I 0.759
Gorai.008G077900 Gossypium raimondii Gorai.008G077900 I 0.775
Gorai.009G214300 Gossypium raimondii Gorai.009G214300 I 0.772
Gorai.010G021900 Gossypium raimondii Gorai.010G021900 I 0.759
GRMZM2G119865 Zea mays GRMZM2G119865 I 0.782
GRMZM2G174917 Zea mays GRMZM2G174917 I 0.799
GRMZM2G301860 Zea mays GRMZM2G301860 I 0.779
GRMZM2G421033 Zea mays GRMZM2G421033 I 0.799
GSMUA_Achr3G13190_001 Musa acuminata GSMUA_Achr3G13190_001 I 0.787
GSMUA_Achr4G20280_001 Musa acuminata GSMUA_Achr4G20280_001 I 0.769
GSMUA_Achr5G22190_001 Musa acuminata GSMUA_Achr5G22190_001 I 0.774
GSMUA_Achr7G05410_001 Musa acuminata GSMUA_Achr7G05410_001 I 0.769
GSMUA_Achr7G20800_001 Musa acuminata GSMUA_Achr7G20800_001 I 0.763
GSMUA_Achr8G15640_001 Musa acuminata GSMUA_Achr8G15640_001 I 0.773
GSMUA_Achr9G11310_001 Musa acuminata GSMUA_Achr9G11310_001 I 0.785
GSMUA_AchrUn_randomG12040_001 Musa acuminata GSMUA_AchrUn_randomG12040_001 I 0.792
GSMUA_AchrUn_randomG26940_001 Musa acuminata GSMUA_AchrUn_randomG26940_001 I 0.786
LjSGA_004289.2 Lotus japonicus LjSGA_004289.2 I 0.782
LjSGA_007705.1 Lotus japonicus LjSGA_007705.1 I 0.722
LjSGA_134387.1 Lotus japonicus LjSGA_134387.1 I 0.750
LPERR04G23120 Leersia perrieri LPERR04G23120 I 0.799
LPERR06G04000 Leersia perrieri LPERR06G04000 I 0.815
Lus10009373.g Linum usitatissimum Lus10009373.g I 0.766
Lus10010043.g Linum usitatissimum Lus10010043.g I 0.782
Lus10018727.g Linum usitatissimum Lus10018727.g I 0.780
MDP0000125673 Malus domestica MDP0000125673 I 0.774
MDP0000179962 Malus domestica MDP0000179962 I 0.774
MDP0000756341 Malus domestica MDP0000756341 I 0.785
mgf000289m Mimulus guttatus mgf000289m I 0.767
mgf006561m Mimulus guttatus mgf006561m I 0.758
mgf021115m Mimulus guttatus mgf021115m I 0.765
mgf025363m Mimulus guttatus mgf025363m I 0.771
MLOC_81350 Hordeum vulgare MLOC_81350 I 0.798
MTR_1g019110 Medicago truncatula MTR_1g019110 I 0.761
MTR_3g102100 Medicago truncatula MTR_3g102100 I 0.719
MTR_5g016750 Medicago truncatula MTR_5g016750 I 0.780
OBART06G04460 Oryza barthii OBART06G04460 I 0.815
OGLUM04G27370 Oryza glumaepatula OGLUM04G27370 I 0.799
OGLUM06G04560 Oryza glumaepatula OGLUM06G04560 I 0.815
OMERI04G22870 Oryza meridionalis OMERI04G22870 I 0.799
ONIVA04G25910 Oryza nivara ONIVA04G25910 I 0.799
ONIVA06G05630 Oryza nivara ONIVA06G05630 I 0.815
OPUNC06G04240 Oryza punctata OPUNC06G04240 I 0.815
orange1.1g031669m.g Citrus sinensis orange1.1g031669m.g I 0.775
orange1.1g041516m.g Citrus sinensis orange1.1g041516m.g I 0.763
ORGLA04G0237600 Oryza glaberrima ORGLA04G0237600 I 0.799
ORGLA06G0041000 Oryza glaberrima ORGLA06G0041000 I 0.815
ORUFI06G04420 Oryza rufipogon ORUFI06G04420 I 0.815
OS04G0648900 Oryza sativa OS04G0648900 I 0.799
OS06G0166400 Oryza sativa OS06G0166400 I 0.815
Pavir.J04844 Panicum virgatum Pavir.J04844 I 0.799
Pavir.J20437 Panicum virgatum Pavir.J20437 I 0.815
Pavir.J27349 Panicum virgatum Pavir.J27349 I 0.799
Pavir.J34361 Panicum virgatum Pavir.J34361 I 0.815
PGSC0003DMG400004005 Solanum tuberosum PGSC0003DMG400004005 I 0.766
PGSC0003DMG400007951 Solanum tuberosum PGSC0003DMG400007951 I 0.767
PGSC0003DMG400034101 Solanum tuberosum PGSC0003DMG400034101 I 0.756
PK15612.1 Cannabis sativa PK15612.1 I 0.773
POPTR_0002s12550 Populus trichocarpa POPTR_0002s12550 I 0.780
POPTR_0005s18430 Populus trichocarpa POPTR_0005s18430 I 0.794
POPTR_0007s10750 Populus trichocarpa POPTR_0007s10750 I 0.794
POPTR_0014s02530 Populus trichocarpa POPTR_0014s02530 I 0.780
PRUPE_ppa012302mg Prunus persica PRUPE_ppa012302mg I 0.791
PRUPE_ppa012516mg Prunus persica PRUPE_ppa012516mg I 0.772
RAP2-1 Arabidopsis thaliana AT1G46768 D 0.716
RAP2-10 Arabidopsis thaliana AT4G36900 D 0.762
RAP2-9 Arabidopsis thaliana AT4G06746 D 0.768
RAP2.1 Arabidopsis lyrata scaffold_104275.1 I 0.719
RAP2.10 Arabidopsis lyrata scaffold_700370.1 I 0.762
RAP2.9 Arabidopsis lyrata fgenesh2_kg.6__2823__AT4G06746.1 I 0.768
SapurV1A.0167s0190 Salix purpurea SapurV1A.0167s0190 I 0.782
SapurV1A.0423s0180 Salix purpurea SapurV1A.0423s0180 I 0.780
SapurV1A.0689s0100 Salix purpurea SapurV1A.0689s0100 I 0.794
SapurV1A.1340s0030 Salix purpurea SapurV1A.1340s0030 I 0.780
SapurV1A.1616s0040 Salix purpurea SapurV1A.1616s0040 I 0.780
SapurV1A.2355s0030 Salix purpurea SapurV1A.2355s0030 I 0.780
Sb06g030660 Sorghum bicolor Sb06g030660 I 0.799
Sb10g004580 Sorghum bicolor Sb10g004580 I 0.815
Solyc04g078640.1 Solanum lycopersicum Solyc04g078640.1 I 0.767
TCM_000669 Theobroma cacao TCM_000669 I 0.775
TCM_033791 Theobroma cacao TCM_033791 I 0.770
Thhalv10000354m.g Eutrema salsugineum Thhalv10000354m.g I 0.720
Thhalv10004985m.g Eutrema salsugineum Thhalv10004985m.g I 0.763
Thhalv10026288m.g Eutrema salsugineum Thhalv10026288m.g I 0.762
Thhalv10029052m.g Eutrema salsugineum Thhalv10029052m.g I 0.761
Traes_2BL_1E57B73B21 Triticum aestivum Traes_2BL_1E57B73B21 I 0.798
VIT_07s0031g00190 Vitis vinifera VIT_07s0031g00190 I 0.768
VIT_18s0001g10150 Vitis vinifera VIT_18s0001g10150 I 0.755