DREB2B (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 fgenesh2_kg.3__1148__AT3G11020.1 T001664_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.750 0.898
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.750 0.898
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.3__1148__AT3G11020.1 AP2 76 127

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g141310 Brassica oleracea Bo1g141310 I 0.724
Bo2g006960 Brassica oleracea Bo2g006960 I 0.760
Bo3g063910 Brassica oleracea Bo3g063910 I 0.723
Bo5g136930 Brassica oleracea Bo5g136930 I 0.717
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.746
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.750
Bra001386 Brassica rapa Bra001386 I 0.724
Bra005852 Brassica rapa Bra005852 I 0.755
Bra028759 Brassica rapa Bra028759 I 0.760
Bra029889 Brassica rapa Bra029889 I 0.717
Bra034159 Brassica rapa Bra034159 I 0.734
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.756
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.762
Cagra.7053s0020 Capsella grandiflora Cagra.7053s0020 I 0.678
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.756
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.762
Carubv10023556m.g Capsella rubella Carubv10023556m.g I 0.678
chr1.LjT01D01.90.nd Lotus japonicus chr1.LjT01D01.90.nd I 0.704
DREB2A Arabidopsis thaliana AT5G05410 D 0.750
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.756
DREB2B Arabidopsis thaliana AT3G11020 I 0.704
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.698
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.689
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.692
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.679
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.679
Solyc06g050520.1 Solanum lycopersicum Solyc06g050520.1 I 0.685
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.735