CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G376255
(
Zea mays
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GRMZM2G376255
T002226_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK08602.1
M01098_2.00
Cannabis sativa
NYCACCGCYN
NRGCGGTGRN
PBM
Lambert et al.(2019)
pTH11421
0.792
0.900
DREB2F
M06630_2.00
Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR
Dap-seq
OMalley et al.(2016)
AT3G57600_col_a
0.769
0.880
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.679
0.780
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.679
0.780
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.679
0.780
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G376255_P01
AP2
26
77
CEYRGVRQRTWGKWVAEIREPNKRARLWLGSFATAEEAALAYDEAARRLYGT
Links
Other
AP2
family TFs
Other
Zea mays
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
21336_YPL248C
Saccharomyces mikatae
21336_YPL248C
I
21920_YPL248C
Saccharomyces paradoxus
21920_YPL248C
I
24374_YPL248C
Saccharomyces bayanus
24374_YPL248C
I
AWRI1499_3090
Brettanomyces bruxellensis
AWRI1499_3090
I
CANTEDRAFT_103981
Candida tenuis
CANTEDRAFT_103981
I
CANTEDRAFT_110774
Candida tenuis
CANTEDRAFT_110774
N
CaO19.12798
Candida albicans
CaO19.12798
N
CaO19.5338
Candida albicans
CaO19.5338
N
CD36_24740
Candida dubliniensis
CD36_24740
N
CLUG_00203
Clavispora lusitaniae
CLUG_00203
I
CLUG_00203
Candida lusitaniae
CLUG_00203
I
CORT_0C07270
Candida orthopsilosis
CORT_0C07270
N
CPAG_02485
Candida parapsilosis
CPAG_02485
N
CTRG_01928
Candida tropicalis
CTRG_01928
N
DEHA2C11418g
Debaryomyces hansenii
DEHA2C11418g
N
DEHA2F03366g
Debaryomyces hansenii
DEHA2F03366g
I
G210_5810
Candida maltosa
G210_5810
N
GAL4
Saccharomyces cerevisiae
YPL248C
D
GNLVRS01_PISO0E01698g
Millerozyma farinosa
GNLVRS01_PISO0E01698g
N
GNLVRS01_PISO0I01526g
Millerozyma farinosa
GNLVRS01_PISO0I01526g
N
GNLVRS01_PISO0J02671g
Millerozyma farinosa
GNLVRS01_PISO0J02671g
I
gwh1.6.1.1306.1
Pichia stipitis
gwh1.6.1.1306.1
N
JL09_g5364
Pichia kudriavzevii
JL09_g5364
N
KUCA_T00002035001
Kuraishia capsulata
KUCA_T00002035001
N
KUCA_T00003059001
Kuraishia capsulata
KUCA_T00003059001
N
LELG_02329
Lodderomyces elongisporus
LELG_02329
N
NCAS_0G01100
Naumovozyma castellii
NCAS_0G01100
I
PAS_FragB_0075
Komagataella pastoris
PAS_FragB_0075
I
PGUG_04835
Candida guilliermondii
PGUG_04835
I
PGUG_04835
Meyerozyma guilliermondii
PGUG_04835
I
PICST_46395
Scheffersomyces stipitis
PICST_46395
N
PICST_9952
Scheffersomyces stipitis
PICST_9952
N
SAKL0A02860g
Lachancea kluyveri
SAKL0A02860g
I
Scas_Contig699.7
Saccharomyces castellii
Scas_Contig699.7
I
SKUD_900401
Saccharomyces kudriavzevii
SKUD_900401
I
SPAPADRAFT_137810
Spathaspora passalidarum
SPAPADRAFT_137810
N
SU7_3455
Saccharomyces arboricola
SU7_3455
I
TBLA_0G01800
Tetrapisispora blattae
TBLA_0G01800
I
TPHA_0H01980
Tetrapisispora phaffii
TPHA_0H01980
I
XP_002490850.1
Pichia pastoris
XP_002490850.1
I
ZBAI_04658
Zygosaccharomyces bailii
ZBAI_04658
I
ZBAI_06699
Zygosaccharomyces bailii
ZBAI_06699
I
ZYRO0E08272g
Zygosaccharomyces rouxii
ZYRO0E08272g
N