CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr1G27990_001
(
Musa acuminata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GSMUA_Achr1G27990_001
T002325_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr1P27990_001
AP2
84
135
KVYRGVRQRQWGKWVAEIRLPQNRTRIWLGTYYSPESAAYAYDRAAYKLRGE
Links
Other
AP2
family TFs
Other
Musa acuminata
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00107p00095070
Amborella trichopoda
AMTR_s00107p00095070
I
0.701
BGIOSGA017525
Oryza indica
BGIOSGA017525
N
0.718
Bostr.0568s0279
Boechera stricta
Bostr.0568s0279
I
0.682
BRADI2G15847
Brachypodium distachyon
BRADI2G15847
N
0.724
Cagra.0917s0073
Capsella grandiflora
Cagra.0917s0073
I
0.682
Carubv10026925m.g
Capsella rubella
Carubv10026925m.g
I
0.682
cassava42814.valid.m1
Manihot esculenta
cassava42814.valid.m1
I
0.677
Eucgr.D01731
Eucalyptus grandis
Eucgr.D01731
I
0.708
Gorai.006G207800
Gossypium raimondii
Gorai.006G207800
I
0.727
Gorai.008G253900
Gossypium raimondii
Gorai.008G253900
I
0.730
Gorai.012G130600
Gossypium raimondii
Gorai.012G130600
I
0.681
GRMZM2G100982
Zea mays
GRMZM2G100982
I
0.707
GRMZM5G846057
Zea mays
GRMZM5G846057
I
0.707
LPERR05G22130
Leersia perrieri
LPERR05G22130
N
0.718
mgf016403m
Mimulus guttatus
mgf016403m
I
0.727
MLOC_53577
Hordeum vulgare
MLOC_53577
N
0.724
OGLUM05G28130
Oryza glumaepatula
OGLUM05G28130
N
0.718
ONIVA05G28560
Oryza nivara
ONIVA05G28560
N
0.718
OPUNC05G24070
Oryza punctata
OPUNC05G24070
N
0.718
ORGLA03G0412600
Oryza glaberrima
ORGLA03G0412600
N
0.718
ORGLA05G0229700
Oryza glaberrima
ORGLA05G0229700
N
0.718
ORUFI05G28440
Oryza rufipogon
ORUFI05G28440
N
0.718
OS05G0572000
Oryza sativa
OS05G0572000
N
0.718
Pavir.J01332
Panicum virgatum
Pavir.J01332
N
0.718
Pavir.J10163
Panicum virgatum
Pavir.J10163
N
0.718
Sb09g029070
Sorghum bicolor
Sb09g029070
N
0.724
TCM_016452
Theobroma cacao
TCM_016452
I
0.680