CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb09g029070
(
Sorghum bicolor
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Sb09g029070
T005065_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb09g029070.1
AP2
119
170
KLYRGVRQRQWGKWVAEIRLPQNRVRVWLGTYDSPETAAHAYDRAAYRLRGE
Links
Other
AP2
family TFs
Other
Sorghum bicolor
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI2G15847
Brachypodium distachyon
BRADI2G15847
N
0.830
MLOC_53577
Hordeum vulgare
MLOC_53577
N
0.824
GRMZM2G100982
Zea mays
GRMZM2G100982
I
0.814
GRMZM5G846057
Zea mays
GRMZM5G846057
I
0.814
BGIOSGA017525
Oryza indica
BGIOSGA017525
N
0.810
LPERR05G22130
Leersia perrieri
LPERR05G22130
N
0.810
OGLUM05G28130
Oryza glumaepatula
OGLUM05G28130
N
0.810
ONIVA05G28560
Oryza nivara
ONIVA05G28560
N
0.810
OPUNC05G24070
Oryza punctata
OPUNC05G24070
N
0.810
ORGLA03G0412600
Oryza glaberrima
ORGLA03G0412600
N
0.810
ORGLA05G0229700
Oryza glaberrima
ORGLA05G0229700
N
0.810
ORUFI05G28440
Oryza rufipogon
ORUFI05G28440
N
0.810
OS05G0572000
Oryza sativa
OS05G0572000
N
0.810
Pavir.J01332
Panicum virgatum
Pavir.J01332
N
0.810
Pavir.J10163
Panicum virgatum
Pavir.J10163
N
0.810
Gorai.006G207800
Gossypium raimondii
Gorai.006G207800
I
0.804
Gorai.008G253900
Gossypium raimondii
Gorai.008G253900
I
0.791
mgf016403m
Mimulus guttatus
mgf016403m
I
0.742
evm.TU.supercontig_79.43
Carica papaya
evm.TU.supercontig_79.43
I
0.738
GSMUA_Achr1G27990_001
Musa acuminata
GSMUA_Achr1G27990_001
N
0.724
Gorai.007G026200
Gossypium raimondii
Gorai.007G026200
N
0.720
Cla011559
Citrullus lanatus
Cla011559
I
0.696
Cucsa.303840
Cucumis sativus
Cucsa.303840
I
0.696
Ciclev10021265m.g
Citrus clementina
Ciclev10021265m.g
I
0.694
orange1.1g045091m.g
Citrus sinensis
orange1.1g045091m.g
I
0.694
Gorai.012G130600
Gossypium raimondii
Gorai.012G130600
I
0.689
Eucgr.D01731
Eucalyptus grandis
Eucgr.D01731
I
0.684
ERF061
Arabidopsis thaliana
AT1G64380
I
0.683
fgenesh2_kg.2__42__AT1G64380.1
Arabidopsis lyrata
fgenesh2_kg.2__42__AT1G64380.1
I
0.683
GLYMA01G43450
Glycine max
GLYMA01G43450
I
0.683
GLYMA11G02050
Glycine max
GLYMA11G02050
I
0.683
POPTR_0001s10540
Populus trichocarpa
POPTR_0001s10540
I
0.683
PRUPE_ppa009005mg
Prunus persica
PRUPE_ppa009005mg
I
0.683
Cla011093
Citrullus lanatus
Cla011093
I
0.683
Pm024053
Prunus mume
Pm024053
I
0.683
30190.m010825
Ricinus communis
30190.m010825
I
0.683
mgf021167m
Mimulus guttatus
mgf021167m
I
0.683
Aquca_037_00132
Aquilegia coerulea
Aquca_037_00132
I
0.683
Bostr.29223s0053
Boechera stricta
Bostr.29223s0053
I
0.683
Cagra.0062s0002
Capsella grandiflora
Cagra.0062s0002
I
0.683
Carubv10020622m.g
Capsella rubella
Carubv10020622m.g
I
0.683
Eucgr.E00857
Eucalyptus grandis
Eucgr.E00857
I
0.683
gene32084-v1.0-hybrid
Fragaria vesca
gene32084-v1.0-hybrid
I
0.683
Lus10001898.g
Linum usitatissimum
Lus10001898.g
I
0.683
Lus10003889.g
Linum usitatissimum
Lus10003889.g
I
0.683
MDP0000292965
Malus domestica
MDP0000292965
I
0.683
MDP0000861708
Malus domestica
MDP0000861708
I
0.683
SapurV1A.0035s0570
Salix purpurea
SapurV1A.0035s0570
I
0.683
SapurV1A.0237s0310
Salix purpurea
SapurV1A.0237s0310
I
0.683
Thhalv10023588m.g
Eutrema salsugineum
Thhalv10023588m.g
I
0.683
chr2.CM0060.390.nc
Lotus japonicus
chr2.CM0060.390.nc
I
0.683
VIT_19s0014g03180
Vitis vinifera
VIT_19s0014g03180
I
0.682
VIT_02s0025g01360
Vitis vinifera
VIT_02s0025g01360
I
0.681
cassava42814.valid.m1
Manihot esculenta
cassava42814.valid.m1
I
0.681
POPTR_0003s13910
Populus trichocarpa
POPTR_0003s13910
I
0.680