CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf016403m
(
Mimulus guttatus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
mgf016403m
T007360_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT5G65130
M06686_2.00
Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR
Dap-seq
OMalley et al.(2016)
At5g65130_col_a
0.686
0.740
AT5G65130
M06687_2.00
Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN
Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a
0.686
0.740
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf016403m
AP2
75
126
KMYRGVRQRQWGKWVAEIRLPQNRVRVWLGTYDTAEAAAYAYDRAAYKLRGE
Links
Other
AP2
family TFs
Other
Mimulus guttatus
TFs
81 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.006G207800
Gossypium raimondii
Gorai.006G207800
I
0.771
Gorai.008G253900
Gossypium raimondii
Gorai.008G253900
I
0.758
MLOC_53577
Hordeum vulgare
MLOC_53577
N
0.752
ERF061
Arabidopsis thaliana
AT1G64380
I
0.750
fgenesh2_kg.2__42__AT1G64380.1
Arabidopsis lyrata
fgenesh2_kg.2__42__AT1G64380.1
I
0.750
GLYMA01G43450
Glycine max
GLYMA01G43450
I
0.750
GLYMA11G02050
Glycine max
GLYMA11G02050
I
0.750
POPTR_0001s10540
Populus trichocarpa
POPTR_0001s10540
I
0.750
PRUPE_ppa009005mg
Prunus persica
PRUPE_ppa009005mg
I
0.750
Cla011093
Citrullus lanatus
Cla011093
I
0.750
Pm024053
Prunus mume
Pm024053
I
0.750
30190.m010825
Ricinus communis
30190.m010825
I
0.750
mgf021167m
Mimulus guttatus
mgf021167m
I
0.750
Bostr.29223s0053
Boechera stricta
Bostr.29223s0053
I
0.750
Cagra.0062s0002
Capsella grandiflora
Cagra.0062s0002
I
0.750
Carubv10020622m.g
Capsella rubella
Carubv10020622m.g
I
0.750
Eucgr.E00857
Eucalyptus grandis
Eucgr.E00857
I
0.750
gene32084-v1.0-hybrid
Fragaria vesca
gene32084-v1.0-hybrid
I
0.750
Lus10001898.g
Linum usitatissimum
Lus10001898.g
I
0.750
Lus10003889.g
Linum usitatissimum
Lus10003889.g
I
0.750
MDP0000292965
Malus domestica
MDP0000292965
I
0.750
MDP0000861708
Malus domestica
MDP0000861708
I
0.750
SapurV1A.0035s0570
Salix purpurea
SapurV1A.0035s0570
I
0.750
SapurV1A.0237s0310
Salix purpurea
SapurV1A.0237s0310
I
0.750
Thhalv10023588m.g
Eutrema salsugineum
Thhalv10023588m.g
I
0.750
chr2.CM0060.390.nc
Lotus japonicus
chr2.CM0060.390.nc
I
0.750
VIT_02s0025g01360
Vitis vinifera
VIT_02s0025g01360
I
0.748
cassava42814.valid.m1
Manihot esculenta
cassava42814.valid.m1
I
0.748
POPTR_0003s13910
Populus trichocarpa
POPTR_0003s13910
I
0.747
BRADI2G15847
Brachypodium distachyon
BRADI2G15847
N
0.742
Sb09g029070
Sorghum bicolor
Sb09g029070
N
0.742
BGIOSGA017525
Oryza indica
BGIOSGA017525
N
0.737
Bo9g030900
Brassica oleracea
Bo9g030900
I
0.737
Bra027697
Brassica rapa
Bra027697
I
0.737
LPERR05G22130
Leersia perrieri
LPERR05G22130
N
0.737
MTR_5g009410
Medicago truncatula
MTR_5g009410
I
0.737
OGLUM05G28130
Oryza glumaepatula
OGLUM05G28130
N
0.737
ONIVA05G28560
Oryza nivara
ONIVA05G28560
N
0.737
OPUNC05G24070
Oryza punctata
OPUNC05G24070
N
0.737
ORGLA03G0412600
Oryza glaberrima
ORGLA03G0412600
N
0.737
ORGLA05G0229700
Oryza glaberrima
ORGLA05G0229700
N
0.737
ORUFI05G28440
Oryza rufipogon
ORUFI05G28440
N
0.737
OS05G0572000
Oryza sativa
OS05G0572000
N
0.737
PGSC0003DMG400012154
Solanum tuberosum
PGSC0003DMG400012154
I
0.737
Solyc08g082210.2
Solanum lycopersicum
Solyc08g082210.2
I
0.737
Pavir.J01332
Panicum virgatum
Pavir.J01332
N
0.737
Pavir.J10163
Panicum virgatum
Pavir.J10163
N
0.737
PK09586.1
Cannabis sativa
PK09586.1
I
0.737
TCM_016452
Theobroma cacao
TCM_016452
I
0.735
Ciclev10021265m.g
Citrus clementina
Ciclev10021265m.g
I
0.735
orange1.1g045091m.g
Citrus sinensis
orange1.1g045091m.g
I
0.735
Ca_15031
Cicer arietinum
Ca_15031
I
0.730
Gorai.004G133800
Gossypium raimondii
Gorai.004G133800
I
0.730
Gorai.007G240700
Gossypium raimondii
Gorai.007G240700
I
0.729
GSMUA_Achr1G27990_001
Musa acuminata
GSMUA_Achr1G27990_001
N
0.727
GRMZM2G100982
Zea mays
GRMZM2G100982
I
0.726
GRMZM5G846057
Zea mays
GRMZM5G846057
I
0.726
chr4.CM0025.250.nd
Lotus japonicus
chr4.CM0025.250.nd
I
0.723
GSMUA_Achr1G00070_001
Musa acuminata
GSMUA_Achr1G00070_001
I
0.722
PGSC0003DMG400005837
Solanum tuberosum
PGSC0003DMG400005837
I
0.716
Aquca_037_00132
Aquilegia coerulea
Aquca_037_00132
I
0.705
evm.TU.supercontig_79.43
Carica papaya
evm.TU.supercontig_79.43
I
0.705
Gorai.006G222600
Gossypium raimondii
Gorai.006G222600
I
0.702
VIT_19s0014g03180
Vitis vinifera
VIT_19s0014g03180
I
0.701
Eucgr.D01731
Eucalyptus grandis
Eucgr.D01731
I
0.696
Gorai.012G130600
Gossypium raimondii
Gorai.012G130600
I
0.696
Bostr.0568s0279
Boechera stricta
Bostr.0568s0279
I
0.692
Cagra.0917s0073
Capsella grandiflora
Cagra.0917s0073
I
0.692
Carubv10026925m.g
Capsella rubella
Carubv10026925m.g
I
0.692
chr5.CM0909.290.nc
Lotus japonicus
chr5.CM0909.290.nc
I
0.692
AMTR_s00107p00095070
Amborella trichopoda
AMTR_s00107p00095070
I
0.689
Cucsa.107350
Cucumis sativus
Cucsa.107350
I
0.689
AT5G65130
Arabidopsis thaliana
AT5G65130
D
0.686
scaffold_803239.1
Arabidopsis lyrata
scaffold_803239.1
I
0.686
Gorai.007G026200
Gossypium raimondii
Gorai.007G026200
N
0.683
AMTR_s00009p00268560
Amborella trichopoda
AMTR_s00009p00268560
I
0.677
POPTR_0002s09480
Populus trichocarpa
POPTR_0002s09480
I
0.677
mgf002388m
Mimulus guttatus
mgf002388m
I
0.677
Eucgr.F02440
Eucalyptus grandis
Eucgr.F02440
I
0.677
SapurV1A.0010s0170
Salix purpurea
SapurV1A.0010s0170
I
0.677
PK27482.1
Cannabis sativa
PK27482.1
I
0.677