OGLUM03G06750 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM03G06750 T003226_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.839 0.940
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.839 0.940
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.832 0.920
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.697 0.820
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.697 0.820
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.683 0.660
ERF054
M06647_2.00 		Arabidopsis thaliana
NNNNNNNNNHHDSCRCCGHC
GDCGGYGSHDDNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_col_a 		0.681 0.820
ERF054
M06648_2.00 		Arabidopsis thaliana
NNNNHDBCRCCGHCM
KGDCGGYGVHDNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_colamp_a 		0.681 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM03G06750.1 AP2 109 160

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

454 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29598.m000464 Ricinus communis 29598.m000464 N 0.000
29883.m001988 Ricinus communis 29883.m001988 N 0.000
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N 0.000
AT1G03040 Arabidopsis thaliana AT1G03040 N 0.000
BGIOSGA013729 Oryza indica BGIOSGA013729 I 0.000
BGIOSGA025266 Oryza indica BGIOSGA025266 I 0.000
BGIOSGA030928 Oryza indica BGIOSGA030928 N 0.000
Bo01031s030 Brassica oleracea Bo01031s030 N 0.000
Bo2g100750 Brassica oleracea Bo2g100750 N 0.000
Bo5g003580 Brassica oleracea Bo5g003580 N 0.000
Bo9g005930 Brassica oleracea Bo9g005930 N 0.000
Bostr.2983s0202 Boechera stricta Bostr.2983s0202 N 0.000
Bra000872 Brassica rapa Bra000872 N 0.000
Bra018539 Brassica rapa Bra018539 N 0.000
Bra033368 Brassica rapa Bra033368 N 0.000
Bra036256 Brassica rapa Bra036256 N 0.000
BRADI1G05430 Brachypodium distachyon BRADI1G05430 I 0.000
BRADI1G55427 Brachypodium distachyon BRADI1G55427 I 0.000
BRADI3G54070 Brachypodium distachyon BRADI3G54070 I 0.000
Cagra.0635s0023 Capsella grandiflora Cagra.0635s0023 N 0.000
Cagra.0897s0074 Capsella grandiflora Cagra.0897s0074 N 0.000
Carubv10001523m.g Capsella rubella Carubv10001523m.g N 0.000
Carubv10009831m.g Capsella rubella Carubv10009831m.g N 0.000
cassava18573.valid.m1 Manihot esculenta cassava18573.valid.m1 N 0.000
cassava22704.valid.m1 Manihot esculenta cassava22704.valid.m1 N 0.000
cassava36725.valid.m1 Manihot esculenta cassava36725.valid.m1 N 0.000
Ca_03755 Cicer arietinum Ca_03755 N 0.000
Ca_07790 Cicer arietinum Ca_07790 N 0.000
Ca_12194 Cicer arietinum Ca_12194 N 0.000
chr1.CM0375.380.nc Lotus japonicus chr1.CM0375.380.nc N 0.000
chr5.LjT29J15.30.nc Lotus japonicus chr5.LjT29J15.30.nc N 0.000
Ciclev10001768m.g Citrus clementina Ciclev10001768m.g N 0.000
Ciclev10021443m.g Citrus clementina Ciclev10021443m.g N 0.000
Cla011475 Citrullus lanatus Cla011475 N 0.000
Cla015040 Citrullus lanatus Cla015040 N 0.000
Cucsa.289090 Cucumis sativus Cucsa.289090 N 0.000
Cucsa.388780 Cucumis sativus Cucsa.388780 N 0.000
Eucgr.B01487 Eucalyptus grandis Eucgr.B01487 N 0.000
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N 0.000
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N 0.000
evm.TU.supercontig_52.97 Carica papaya evm.TU.supercontig_52.97 N 0.000
fgenesh2_kg.1__235__AT1G03040.1 Arabidopsis lyrata fgenesh2_kg.1__235__AT1G03040.1 N 0.000
gene08188-v1.0-hybrid Fragaria vesca gene08188-v1.0-hybrid N 0.000
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N 0.000
GLYMA02G16110 Glycine max GLYMA02G16110 N 0.000
GLYMA03G31510 Glycine max GLYMA03G31510 N 0.000
GLYMA10G03690 Glycine max GLYMA10G03690 N 0.000
GLYMA10G30430 Glycine max GLYMA10G30430 N 0.000
GLYMA19G34360 Glycine max GLYMA19G34360 N 0.000
GLYMA20G36770 Glycine max GLYMA20G36770 N 0.000
Gorai.001G242500 Gossypium raimondii Gorai.001G242500 N 0.000
Gorai.004G075200 Gossypium raimondii Gorai.004G075200 N 0.000
Gorai.004G218900 Gossypium raimondii Gorai.004G218900 N 0.000
Gorai.007G141800 Gossypium raimondii Gorai.007G141800 N 0.000
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N 0.000
GRMZM2G004356 Zea mays GRMZM2G004356 I 0.000
GRMZM2G162382 Zea mays GRMZM2G162382 I 0.000
GSMUA_Achr4G21070_001 Musa acuminata GSMUA_Achr4G21070_001 I 0.000
GSMUA_Achr5G03100_001 Musa acuminata GSMUA_Achr5G03100_001 I 0.000
GSMUA_Achr9G25560_001 Musa acuminata GSMUA_Achr9G25560_001 I 0.000
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.000
LPERR03G31640 Leersia perrieri LPERR03G31640 I 0.000
LPERR07G04600 Leersia perrieri LPERR07G04600 I 0.000
Lus10002720.g Linum usitatissimum Lus10002720.g N 0.000
Lus10006587.g Linum usitatissimum Lus10006587.g N 0.000
Lus10014726.g Linum usitatissimum Lus10014726.g N 0.000
Lus10015909.g Linum usitatissimum Lus10015909.g N 0.000
Lus10018761.g Linum usitatissimum Lus10018761.g N 0.000
Lus10024850.g Linum usitatissimum Lus10024850.g N 0.000
MDP0000176749 Malus domestica MDP0000176749 N 0.000
MDP0000295593 Malus domestica MDP0000295593 N 0.000
mgf001465m Mimulus guttatus mgf001465m N 0.000
MTR_1g070870 Medicago truncatula MTR_1g070870 N 0.000
MTR_1g080890 Medicago truncatula MTR_1g080890 N 0.000
OB07G13990 Oryza brachyantha OB07G13990 I 0.000
OBART03G37400 Oryza barthii OBART03G37400 I 0.000
OBART07G05280 Oryza barthii OBART07G05280 I 0.000
OGLUM03G37150 Oryza glumaepatula OGLUM03G37150 I 0.000
OGLUM07G04790 Oryza glumaepatula OGLUM07G04790 I 0.000
OLONG_014165 Oryza longistaminata OLONG_014165 I 0.000
OMERI03G34570 Oryza meridionalis OMERI03G34570 I 0.000
OMERI05G15760 Oryza meridionalis OMERI05G15760 I 0.000
OMERI06G24090 Oryza meridionalis OMERI06G24090 I 0.000
ONIVA03G38760 Oryza nivara ONIVA03G38760 I 0.000
ONIVA07G04020 Oryza nivara ONIVA07G04020 I 0.000
OPUNC03G34510 Oryza punctata OPUNC03G34510 I 0.000
OPUNC07G05040 Oryza punctata OPUNC07G05040 I 0.000
OPUNC09G11520 Oryza punctata OPUNC09G11520 I 0.000
ORGLA06G0244900 Oryza glaberrima ORGLA06G0244900 I 0.000
ORGLA07G0044500 Oryza glaberrima ORGLA07G0044500 I 0.000
ORUFI07G05060 Oryza rufipogon ORUFI07G05060 I 0.000
OS03G0797600 Oryza sativa OS03G0797600 I 0.000
Pavir.Ba03672 Panicum virgatum Pavir.Ba03672 I 0.000
Pavir.Fa00651 Panicum virgatum Pavir.Fa00651 N 0.000
Pavir.J00283 Panicum virgatum Pavir.J00283 I 0.000
Pavir.J03221 Panicum virgatum Pavir.J03221 I 0.000
Pavir.J04249 Panicum virgatum Pavir.J04249 I 0.000
Pavir.J25149 Panicum virgatum Pavir.J25149 N 0.000
PGSC0003DMG400006089 Solanum tuberosum PGSC0003DMG400006089 N 0.000
PGSC0003DMG400013393 Solanum tuberosum PGSC0003DMG400013393 N 0.000
PGSC0003DMG400019334 Solanum tuberosum PGSC0003DMG400019334 N 0.000
PK20184.1 Cannabis sativa PK20184.1 N 0.000
PK25419.1 Cannabis sativa PK25419.1 N 0.000
Pm003525 Prunus mume Pm003525 N 0.000
Pm020229 Prunus mume Pm020229 N 0.000
POPTR_0002s04620 Populus trichocarpa POPTR_0002s04620 N 0.000
POPTR_0005s05500 Populus trichocarpa POPTR_0005s05500 N 0.000
POPTR_0005s23930 Populus trichocarpa POPTR_0005s23930 N 0.000
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N 0.000
PRUPE_ppa009299mg Prunus persica PRUPE_ppa009299mg N 0.000
SapurV1A.0006s1290 Salix purpurea SapurV1A.0006s1290 N 0.000
SapurV1A.0729s0150 Salix purpurea SapurV1A.0729s0150 N 0.000
SapurV1A.0860s0050 Salix purpurea SapurV1A.0860s0050 N 0.000
Sb02g004570 Sorghum bicolor Sb02g004570 I 0.000
Si030704m.g Setaria italica Si030704m.g I 0.000
Si036929m.g Setaria italica Si036929m.g I 0.000
Solyc03g005350.2 Solanum lycopersicum Solyc03g005350.2 N 0.000
Solyc09g065820.2 Solanum lycopersicum Solyc09g065820.2 N 0.000
Solyc09g083220.2 Solanum lycopersicum Solyc09g083220.2 N 0.000
TCM_004217 Theobroma cacao TCM_004217 N 0.000
TCM_026346 Theobroma cacao TCM_026346 N 0.000
Thhalv10008279m.g Eutrema salsugineum Thhalv10008279m.g N 0.000
Thhalv10028824m.g Eutrema salsugineum Thhalv10028824m.g N 0.000
Traes_6BL_AEB13ECDE Triticum aestivum Traes_6BL_AEB13ECDE I 0.000
UNE12 Arabidopsis thaliana AT4G02590 N 0.000
UNE12 Arabidopsis lyrata fgenesh2_kg.6__3435__AT4G02590.2 N 0.000
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N 0.000
VIT_07s0141g00220 Vitis vinifera VIT_07s0141g00220 N 0.000
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N 0.000