CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OGLUM05G28130
(
Oryza glumaepatula
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OGLUM05G28130
T003266_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM05G28130.1
AP2
96
147
KLYRGVRQRQWGKWVAEIRLPQNRVRVWLGTYDSPETAAHAYDRAAFKLRGE
Links
Other
AP2
family TFs
Other
Oryza glumaepatula
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30190.m010825
Ricinus communis
30190.m010825
I
0.677
Aquca_037_00132
Aquilegia coerulea
Aquca_037_00132
I
0.677
BGIOSGA017525
Oryza indica
BGIOSGA017525
N
0.827
Bostr.29223s0053
Boechera stricta
Bostr.29223s0053
I
0.677
BRADI2G15847
Brachypodium distachyon
BRADI2G15847
N
0.810
BRADI5G16450
Brachypodium distachyon
BRADI5G16450
I
0.678
Cagra.0062s0002
Capsella grandiflora
Cagra.0062s0002
I
0.677
Carubv10020622m.g
Capsella rubella
Carubv10020622m.g
I
0.677
chr2.CM0060.390.nc
Lotus japonicus
chr2.CM0060.390.nc
I
0.677
Ciclev10021265m.g
Citrus clementina
Ciclev10021265m.g
I
0.688
Cla011093
Citrullus lanatus
Cla011093
I
0.677
Cla011559
Citrullus lanatus
Cla011559
I
0.704
Cucsa.303840
Cucumis sativus
Cucsa.303840
I
0.704
ERF061
Arabidopsis thaliana
AT1G64380
I
0.677
Eucgr.D01731
Eucalyptus grandis
Eucgr.D01731
I
0.701
Eucgr.E00857
Eucalyptus grandis
Eucgr.E00857
I
0.677
evm.TU.supercontig_79.43
Carica papaya
evm.TU.supercontig_79.43
I
0.733
fgenesh2_kg.2__42__AT1G64380.1
Arabidopsis lyrata
fgenesh2_kg.2__42__AT1G64380.1
I
0.677
gene32084-v1.0-hybrid
Fragaria vesca
gene32084-v1.0-hybrid
I
0.677
GLYMA01G43450
Glycine max
GLYMA01G43450
I
0.677
GLYMA11G02050
Glycine max
GLYMA11G02050
I
0.677
Gorai.006G207800
Gossypium raimondii
Gorai.006G207800
I
0.799
Gorai.007G026200
Gossypium raimondii
Gorai.007G026200
N
0.714
Gorai.008G253900
Gossypium raimondii
Gorai.008G253900
I
0.785
Gorai.012G130600
Gossypium raimondii
Gorai.012G130600
I
0.706
GRMZM2G026926
Zea mays
GRMZM2G026926
I
0.678
GRMZM2G100982
Zea mays
GRMZM2G100982
I
0.797
GRMZM5G846057
Zea mays
GRMZM5G846057
I
0.797
GSMUA_Achr1G00070_001
Musa acuminata
GSMUA_Achr1G00070_001
I
0.677
GSMUA_Achr1G27990_001
Musa acuminata
GSMUA_Achr1G27990_001
N
0.718
LPERR05G22130
Leersia perrieri
LPERR05G22130
N
0.827
Lus10001898.g
Linum usitatissimum
Lus10001898.g
I
0.677
Lus10003889.g
Linum usitatissimum
Lus10003889.g
I
0.677
MDP0000292965
Malus domestica
MDP0000292965
I
0.677
MDP0000861708
Malus domestica
MDP0000861708
I
0.677
mgf016403m
Mimulus guttatus
mgf016403m
I
0.737
mgf021167m
Mimulus guttatus
mgf021167m
I
0.677
MLOC_53577
Hordeum vulgare
MLOC_53577
N
0.803
ONIVA05G28560
Oryza nivara
ONIVA05G28560
N
0.827
OPUNC05G24070
Oryza punctata
OPUNC05G24070
N
0.827
orange1.1g045091m.g
Citrus sinensis
orange1.1g045091m.g
I
0.688
ORGLA03G0412600
Oryza glaberrima
ORGLA03G0412600
N
0.827
ORGLA05G0229700
Oryza glaberrima
ORGLA05G0229700
N
0.827
ORUFI05G28440
Oryza rufipogon
ORUFI05G28440
N
0.827
OS05G0572000
Oryza sativa
OS05G0572000
N
0.827
Pavir.Ga00913
Panicum virgatum
Pavir.Ga00913
I
0.678
Pavir.Gb00710
Panicum virgatum
Pavir.Gb00710
I
0.678
Pavir.J01332
Panicum virgatum
Pavir.J01332
N
0.827
Pavir.J10163
Panicum virgatum
Pavir.J10163
N
0.827
Pm024053
Prunus mume
Pm024053
I
0.677
POPTR_0001s10540
Populus trichocarpa
POPTR_0001s10540
I
0.677
PRUPE_ppa009005mg
Prunus persica
PRUPE_ppa009005mg
I
0.677
SapurV1A.0035s0570
Salix purpurea
SapurV1A.0035s0570
I
0.677
SapurV1A.0237s0310
Salix purpurea
SapurV1A.0237s0310
I
0.677
Sb06g023313
Sorghum bicolor
Sb06g023313
I
0.678
Sb09g029070
Sorghum bicolor
Sb09g029070
N
0.810
Si012169m.g
Setaria italica
Si012169m.g
I
0.678
Thhalv10023588m.g
Eutrema salsugineum
Thhalv10023588m.g
I
0.677
VIT_19s0014g03180
Vitis vinifera
VIT_19s0014g03180
I
0.700