Aquca_037_00132 (Aquilegia coerulea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Aquca_037_00132 T007524_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.759 0.840
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.752 0.840
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.752 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_037_00132.1 AP2 115 166

Links

Other AP2 family TFs
Other Aquilegia coerulea TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29872.m000548 Ricinus communis 29872.m000548 N
Aquca_001_00551 Aquilegia coerulea Aquca_001_00551 N
Bo3g083280 Brassica oleracea Bo3g083280 N
Bra001951 Brassica rapa Bra001951 N
cassava1476.valid.m1 Manihot esculenta cassava1476.valid.m1 N
Ca_12978 Cicer arietinum Ca_12978 N
Ciclev10008866m.g Citrus clementina Ciclev10008866m.g N
Ciclev10025757m.g Citrus clementina Ciclev10025757m.g N
Cla015679 Citrullus lanatus Cla015679 N
Cucsa.358990 Cucumis sativus Cucsa.358990 N
Eucgr.J02994 Eucalyptus grandis Eucgr.J02994 N
evm.TU.supercontig_181.13 Carica papaya evm.TU.supercontig_181.13 N
gene02091-v1.0-hybrid Fragaria vesca gene02091-v1.0-hybrid N
gene05956-v1.0-hybrid Fragaria vesca gene05956-v1.0-hybrid N
GLYMA13G43651 Glycine max GLYMA13G43651 N
GLYMA15G01730 Glycine max GLYMA15G01730 N
Gorai.006G098600 Gossypium raimondii Gorai.006G098600 N
Gorai.009G133300 Gossypium raimondii Gorai.009G133300 N
Gorai.010G228000 Gossypium raimondii Gorai.010G228000 N
Lus10025772.g Linum usitatissimum Lus10025772.g N
Lus10035893.g Linum usitatissimum Lus10035893.g N
MDP0000500940 Malus domestica MDP0000500940 N
mgf024433m Mimulus guttatus mgf024433m N
MTR_2g102227 Medicago truncatula MTR_2g102227 N
orange1.1g019823m.g Citrus sinensis orange1.1g019823m.g N
orange1.1g048259m.g Citrus sinensis orange1.1g048259m.g N
PGSC0003DMG400027438 Solanum tuberosum PGSC0003DMG400027438 N
PGSC0003DMG400031382 Solanum tuberosum PGSC0003DMG400031382 N
PK03816.1 Cannabis sativa PK03816.1 N
Pm013502 Prunus mume Pm013502 N
Pm027397 Prunus mume Pm027397 N
POPTR_0001s18000 Populus trichocarpa POPTR_0001s18000 N
POPTR_0003s05470 Populus trichocarpa POPTR_0003s05470 N
PRUPE_ppa009556mg Prunus persica PRUPE_ppa009556mg N
SapurV1A.0002s0250 Salix purpurea SapurV1A.0002s0250 N
SapurV1A.1168s0060 Salix purpurea SapurV1A.1168s0060 N
SapurV1A.3798s0010 Salix purpurea SapurV1A.3798s0010 N
Solyc05g018350.2 Solanum lycopersicum Solyc05g018350.2 N
Solyc12g043090.1 Solanum lycopersicum Solyc12g043090.1 N
TCM_028688 Theobroma cacao TCM_028688 N
VIT_09s0002g04700 Vitis vinifera VIT_09s0002g04700 N
VIT_11s0016g04130 Vitis vinifera VIT_11s0016g04130 N