Bostr.27895s0153 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.27895s0153 T007634_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-10
M00850_2.00 		Arabidopsis thaliana
NNRCCGHCNN
NNGDCGGYNN		 PBM
Franco-Zorrilla et al.(2014)
DEAR4 		0.825 1.000
ERF010
M06690_2.00 		Arabidopsis thaliana
HHNHHDYCACCGHCD
HGDCGGTGRHDDNDD		 Dap-seq
OMalley et al.(2016)
DEAR2_col_a 		0.824 0.960
ERF010
M06691_2.00 		Arabidopsis thaliana
NNNHDBCACCGACAH
DTGTCGGTGVHDNNN		 Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a 		0.824 0.960
ERF011
M06628_2.00 		Arabidopsis thaliana
YHNHHDYCACCGHCN
NGDCGGTGRHDDNDR		 Dap-seq
OMalley et al.(2016)
CEJ1_col_a 		0.823 0.940
ERF011
M06629_2.00 		Arabidopsis thaliana
NDNCACCGACMHH
DDKGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a 		0.823 0.940
ERF008
M00844_2.00 		Arabidopsis thaliana
SHRCCGHC
GDCGGYDS		 PBM
Franco-Zorrilla et al.(2014)
DEAR3 		0.815 0.980
ERF008
M01048_2.00 		Arabidopsis thaliana
CRCCGMCN
NGKCGGYG		 PBM
Sullivan et al.(2014)
pTH7672 		0.815 0.980
ERF008
M06602_2.00 		Arabidopsis thaliana
NNNNNBCACCGACAHHN
NDDTGTCGGTGVNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR3_col_a 		0.815 0.980
ERF008
M06603_2.00 		Arabidopsis thaliana
NNBCACCGACAWH
DWTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a 		0.815 0.980
RAP2-9
M06633_2.00 		Arabidopsis thaliana
NNNNNNNDBCACCGACMHH
DDKGTCGGTGVHNNNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR5_col_a 		0.770 0.940
RAP2-9
M06634_2.00 		Arabidopsis thaliana
NCACCGACMHH
DDKGTCGGTGN		 Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a 		0.770 0.940
RAP2-1
M06582_2.00 		Arabidopsis thaliana
NHDYCRCCGMCAH
DTGKCGGYGRHDN		 Dap-seq
OMalley et al.(2016)
RAP21_col_a 		0.737 0.880
RAP2-1
M06583_2.00 		Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN
NNNNNHDDTGTCGGTGVHDN		 Dap-seq
OMalley et al.(2016)
RAP21_colamp_a 		0.737 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.27895s0153.1.p AP2 26 77

Links

Other AP2 family TFs
Other Boechera stricta TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB007752 Anopheles albimanus AALB007752 I
ACEP16394 Atta cephalotes ACEP16394 I
ACEP16400 Atta cephalotes ACEP16400 I
ACUA008762 Anopheles culicifacies ACUA008762 I
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I
ADIR002676 Anopheles dirus ADIR002676 I
AFAF013225 Anopheles farauti AFAF013225 I
AMAM011616 Anopheles maculatus AMAM011616 I
AQUA009446 Anopheles quadriannulatus AQUA009446 I
BGIBMGA008906 Bombyx mori BGIBMGA008906 I
CABZ01102124.1 Danio rerio ENSDARG00000103592 I
CLEC011124 Cimex lectularius CLEC011124 I
CLEC011126 Cimex lectularius CLEC011126 N
CPIJ006373 Culex quinquefasciatus CPIJ006373 I
CPIJ016825 Culex quinquefasciatus CPIJ016825 I
CpipJ_CPIJ006373 Culex pipiens CpipJ_CPIJ006373 I
CpipJ_CPIJ016825 Culex pipiens CpipJ_CPIJ016825 I
EFV53501 Trichinella spiralis EFV53501 N
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I
ENSMGAG00000002035 Meleagris gallopavo ENSMGAG00000002035 I
ENSOARG00000013599 Ovis aries ENSOARG00000013599 I
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I
Gfo_R013848 Geospiza fortis Gfo_R013848 I
HMEL009842 Heliconius melpomene HMEL009842 I
HMEL014739 Heliconius melpomene HMEL014739 I
KGM_21065 Danaus plexippus KGM_21065 I
LCUP002647 Lucilia cuprina LCUP002647 I
LCUP002656 Lucilia cuprina LCUP002656 I
MCINX000297 Melitaea cinxia MCINX000297 N
MESCA007078 Megaselia scalaris MESCA007078 I
PHUM333310 Pediculus humanus PHUM333310 I
PPAI006591 Phlebotomus papatasi PPAI006591 I
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I
Runx1 Mus musculus ENSMUSG00000022952 D
RUNX1 Monodelphis domestica ENSMODG00000021051 I
Runx2 Mus musculus ENSMUSG00000039153 D
RUNX2 Homo sapiens ENSG00000124813 D
runx2b Danio rerio ENSDARG00000059233 I
SINV13405 Solenopsis invicta SINV13405 I
TC006536 Tribolium castaneum TC006536 I