Lus10022497.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10022497.g T008837_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.844 0.940
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.831 0.920
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.831 0.920
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.715 0.880
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.715 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10022497 AP2 142 193

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

434 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000869 Aedes aegypti AAEL000869 I
AATE011452 Anopheles atroparvus AATE011452 I
ACAC_0000515301 Angiostrongylus cantonensis ACAC_0000515301 I
ACOM022805 Anopheles coluzzii ACOM022805 I
ACYPI008148 Acyrthosiphon pisum ACYPI008148 I
ADIR005637 Anopheles dirus ADIR005637 I
AFAF000823 Anopheles farauti AFAF000823 I
AGAP010926 Anopheles gambiae AGAP010926 I
AMEC011115 Anopheles melas AMEC011115 I
AMEM009379 Anopheles merus AMEM009379 I
ASTEI06414 Anopheles stephensi ASTEI06414 I
BGIBMGA003190 Bombyx mori BGIBMGA003190 I
Bm9493 Brugia malayi Bm9493 I
BXY_1436800 Bursaphelenchus xylophilus BXY_1436800 I
Cflo_04170--XP_001120914.1_APIME Camponotus floridanus Cflo_04170--XP_001120914.1_APIME I
CGI_10001094 Crassostrea gigas CGI_10001094 I
DILT_0000061901 Diphyllobothrium latum DILT_0000061901 I
ENSAMXG00000016347 Astyanax mexicanus ENSAMXG00000016347 I
ENSPTRG00000000961 Pan troglodytes ENSPTRG00000000961 I
GA28112 Drosophila pseudoobscura FBgn0249475 I
GB48486 Apis mellifera GB48486 I
GD12667 Drosophila simulans FBgn0184394 I
GE20069 Drosophila yakuba FBgn0237393 I
GF10411 Drosophila ananassae FBgn0087452 I
GFI1 Procavia capensis ENSPCAG00000011020 I
GFI1B Callithrix jacchus ENSCJAG00000018071 I
GFI1B Homo sapiens ENSG00000165702 D
GFI1B Macaca mulatta ENSMMUG00000005948 I
GFI1B Ochotona princeps ENSOPRG00000000125 I
gfi1b Takifugu rubripes ENSTRUG00000004525 I
GG13774 Drosophila erecta FBgn0106037 I
GH16734 Drosophila grimshawi FBgn0124205 I
GI13460 Drosophila mojavensis FBgn0136216 I
GJ11823 Drosophila virilis FBgn0199077 I
GK12454 Drosophila willistoni FBgn0214464 I
GL15695 Drosophila persimilis FBgn0153299 I
GM24598 Drosophila sechellia FBgn0179461 I
HCOI00212900 Haemonchus contortus HCOI00212900 I
HelroG145534 Helobdella robusta HelroG145534 I
HelroG145685 Helobdella robusta HelroG145685 I
HelroG67579 Helobdella robusta HelroG67579 I
HMEL012459 Heliconius melpomene HMEL012459 I
KGM_22443 Danaus plexippus KGM_22443 I
L798_01833 Zootermopsis nevadensis L798_01833 I
LCUP007432 Lucilia cuprina LCUP007432 I
LLOJ009104 Lutzomyia longipalpis LLOJ009104 I
LotgiG98465 Lottia gigantea LotgiG98465 I
MDOA006012 Musca domestica MDOA006012 I
MESCA000812 Megaselia scalaris MESCA000812 I
MhA1_Contig1061.frz3.gene12 Meloidogyne hapla MhA1_Contig1061.frz3.gene12 I
nAv.1.0.1.g05276 Acanthocheilonema viteae nAv.1.0.1.g05276 I
NV16026 Nasonia vitripennis NV16026 I
PHUM248190 Pediculus humanus PHUM248190 I
PTRK_0000195600 Parastrongyloides trichosuri PTRK_0000195600 I
PXEA_0001261301 Protopolystoma xenopodis PXEA_0001261301 I
RSKR_0000656700 Rhabditophanes kr3021 RSKR_0000656700 I
sens Drosophila melanogaster FBgn0002573 D
SPAL_0000614400 Strongyloides papillosus SPAL_0000614400 I
SSLN_0000272801 Schistocephalus solidus SSLN_0000272801 I
SSTP_0000165900 Strongyloides stercoralis SSTP_0000165900 I
SVE_0901200 Strongyloides venezuelensis SVE_0901200 I
TC013474 Tribolium castaneum TC013474 I
WUBG_13248 Wuchereria bancrofti WUBG_13248 I