MDP0000243113 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000243113 T009047_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF3
M01607_2.00
Arabidopsis thaliana
CGCCGSCR

YGSCGGCG
PBM
Weirauch et al.(2014)
pTH8109
0.716 0.851
ERF3
M06584_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD

HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
ERF3_col_a
0.716 0.851
ERF3
M06585_2.00
Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR

YGRCGGCGGHRNNDNHDDNN
Dap-seq
OMalley et al.(2016)
ERF3_colamp_a
0.716 0.851
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN

NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.702 0.809
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD

HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.702 0.809
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH

DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.702 0.809
ERF13
M01615_2.00
Arabidopsis thaliana
VGCCGSCD

HGSCGGCB
PBM
Weirauch et al.(2014)
pTH7283
0.694 0.723
ERF13
M06612_2.00
Arabidopsis thaliana
NHDBMGCCGCCDYHD

HDRHGGCGGCKVHDN
Dap-seq
OMalley et al.(2016)
ERF13_colamp_a
0.694 0.723
ERF13
M06613_2.00
Arabidopsis thaliana
HDBMGCCGCCDYHDN

NHDRHGGCGGCKVHD
Dap-seq
OMalley et al.(2016)
ERF13_col_b
0.694 0.723
PK17878.1
M01099_2.00
Cannabis sativa
CGCCGYCR

YGRCGGCG
PBM
Lambert et al.(2019)
pTH10133
0.680 0.787
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000243113 AP2 29 80

Links

Other AP2 family TFs
Other Malus domestica TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29640.m000403 Ricinus communis 29640.m000403 I 0.772
30174.m008755 Ricinus communis 30174.m008755 I 0.686
30174.m008756 Ricinus communis 30174.m008756 I 0.684
30190.m011323 Ricinus communis 30190.m011323 I 0.680
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.706
Aquca_017_00628 Aquilegia coerulea Aquca_017_00628 I 0.686
Aquca_027_00311 Aquilegia coerulea Aquca_027_00311 I 0.771
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.694
BGIOSGA005557 Oryza indica BGIOSGA005557 I 0.679
Bo1g102220 Brassica oleracea Bo1g102220 I 0.691
Bo3g074840 Brassica oleracea Bo3g074840 I 0.680
Bo3g143340 Brassica oleracea Bo3g143340 I 0.686
Bo4g024140 Brassica oleracea Bo4g024140 I 0.694
Bo4g195220 Brassica oleracea Bo4g195220 I 0.694
Bo5g055840 Brassica oleracea Bo5g055840 I 0.686
Bo6g022410 Brassica oleracea Bo6g022410 I 0.752
Bo7g040810 Brassica oleracea Bo7g040810 I 0.688
Bo7g048190 Brassica oleracea Bo7g048190 I 0.686
Bostr.15697s0156 Boechera stricta Bostr.15697s0156 I 0.686
Bostr.26675s0113 Boechera stricta Bostr.26675s0113 I 0.702
Bostr.26675s0318 Boechera stricta Bostr.26675s0318 I 0.677
Bra001784 Brassica rapa Bra001784 I 0.680
Bra004873 Brassica rapa Bra004873 I 0.694
Bra010881 Brassica rapa Bra010881 I 0.686
Bra014925 Brassica rapa Bra014925 I 0.688
Bra018864 Brassica rapa Bra018864 I 0.711
Bra023748 Brassica rapa Bra023748 I 0.691
Bra030094 Brassica rapa Bra030094 I 0.686
Bra032898 Brassica rapa Bra032898 I 0.686
Bra037630 Brassica rapa Bra037630 I 0.694
BRADI2G21067 Brachypodium distachyon BRADI2G21067 I 0.677
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.733
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.694
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.717
Cagra.1671s0052 Capsella grandiflora Cagra.1671s0052 I 0.677
Cagra.1822s0023 Capsella grandiflora Cagra.1822s0023 I 0.686
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.717
Carubv10011057m.g Capsella rubella Carubv10011057m.g I 0.677
Carubv10011585m.g Capsella rubella Carubv10011585m.g I 0.686
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.694
cassava19881.m1 Manihot esculenta cassava19881.m1 I 0.681
cassava19882.m1 Manihot esculenta cassava19882.m1 I 0.679
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.687
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.713
cassava42971.valid.m1 Manihot esculenta cassava42971.valid.m1 I 0.680
cassava43266.valid.m1 Manihot esculenta cassava43266.valid.m1 I 0.800
cassava4486.m1 Manihot esculenta cassava4486.m1 I 0.680
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.678
Ca_00326 Cicer arietinum Ca_00326 I 0.680
Ca_12080 Cicer arietinum Ca_12080 I 0.689
Ca_12205 Cicer arietinum Ca_12205 I 0.694
Ca_17824 Cicer arietinum Ca_17824 I 0.699
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I 0.696
chr2.LjT24P12.30.nd Lotus japonicus chr2.LjT24P12.30.nd I 0.756
chr6.CM0114.130.nc Lotus japonicus chr6.CM0114.130.nc I 0.680
Ciclev10006460m.g Citrus clementina Ciclev10006460m.g I 0.681
Ciclev10009361m.g Citrus clementina Ciclev10009361m.g I 0.781
Ciclev10016668m.g Citrus clementina Ciclev10016668m.g I 0.780
Ciclev10016982m.g Citrus clementina Ciclev10016982m.g I 0.680
Cla003319 Citrullus lanatus Cla003319 I 0.735
Cla003678 Citrullus lanatus Cla003678 I 0.679
Cla005423 Citrullus lanatus Cla005423 I 0.741
Cla013723 Citrullus lanatus Cla013723 I 0.714
Cla020002 Citrullus lanatus Cla020002 I 0.680
Cucsa.042770 Cucumis sativus Cucsa.042770 I 0.733
Cucsa.095860 Cucumis sativus Cucsa.095860 I 0.681
Cucsa.126860 Cucumis sativus Cucsa.126860 I 0.680
Cucsa.129330 Cucumis sativus Cucsa.129330 I 0.683
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.716
Cucsa.190200 Cucumis sativus Cucsa.190200 I 0.735
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.695
Cucsa.300100 Cucumis sativus Cucsa.300100 I 0.686
ERF12 Arabidopsis thaliana AT1G28360 I 0.686
ERF12 Arabidopsis lyrata fgenesh2_kg.1__3004__AT1G28360.1 I 0.686
ERF12 Vitis vinifera VIT_10s0003g00130 I 0.680
ERF13 Arabidopsis thaliana AT2G44840 D 0.694
ERF3 Arabidopsis thaliana AT1G50640 D 0.716
ERF3 Arabidopsis lyrata fgenesh2_kg.1__4150__AT1G50640.1 I 0.702
ERF7 Arabidopsis thaliana AT3G20310 D 0.702
estExt_fgeneshCV_pg.C_120242 Chlorella vulgaris estExt_fgeneshCV_pg.C_120242 I 0.677
estExt_Genemark1.C_100079 Coccomyxa subellipsoidea C169 estExt_Genemark1.C_100079 I 0.677
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.697
Eucgr.A01091 Eucalyptus grandis Eucgr.A01091 I 0.756
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.699
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.683
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.683
Eucgr.G00393 Eucalyptus grandis Eucgr.G00393 I 0.679
Eucgr.G00394 Eucalyptus grandis Eucgr.G00394 I 0.678
Eucgr.G00396 Eucalyptus grandis Eucgr.G00396 I 0.678
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.685
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I 0.687
evm.TU.supercontig_12.251 Carica papaya evm.TU.supercontig_12.251 I 0.778
evm.TU.supercontig_132.31 Carica papaya evm.TU.supercontig_132.31 I 0.766
evm.TU.supercontig_27.18 Carica papaya evm.TU.supercontig_27.18 I 0.680
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.702
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.697
fgenesh1_pg.scaffold_6000034 Physcomitrella patens fgenesh1_pg.scaffold_6000034 I 0.698
gene01152-v1.0-hybrid Fragaria vesca gene01152-v1.0-hybrid I 0.779
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.719
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.694
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.686
gene21403-v1.0-hybrid Fragaria vesca gene21403-v1.0-hybrid I 0.689
gene29735-v1.0-hybrid Fragaria vesca gene29735-v1.0-hybrid I 0.680
GLYMA02G43500 Glycine max GLYMA02G43500 I 0.743
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.728
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.711
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.694
GLYMA10G23460 Glycine max GLYMA10G23460 I 0.685
GLYMA10G33070 Glycine max GLYMA10G33070 I 0.678
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.686
GLYMA13G31010 Glycine max GLYMA13G31010 I 0.680
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.706
GLYMA14G05470 Glycine max GLYMA14G05470 I 0.743
GLYMA15G08360 Glycine max GLYMA15G08360 I 0.680
GLYMA20G16920 Glycine max GLYMA20G16920 I 0.685
GLYMA20G34560 Glycine max GLYMA20G34560 I 0.678
Gorai.001G252400 Gossypium raimondii Gorai.001G252400 I 0.686
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I 0.718
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.679
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.733
Gorai.008G155600 Gossypium raimondii Gorai.008G155600 I 0.678
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I 0.699
Gorai.011G029700 Gossypium raimondii Gorai.011G029700 I 0.680
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I 0.698
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.733
GRMZM2G103085 Zea mays GRMZM2G103085 I 0.677
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.732
GSMUA_Achr1G18230_001 Musa acuminata GSMUA_Achr1G18230_001 I 0.755
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I 0.704
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.697
GSMUA_Achr4G04060_001 Musa acuminata GSMUA_Achr4G04060_001 I 0.745
GSMUA_Achr4G06170_001 Musa acuminata GSMUA_Achr4G06170_001 I 0.734
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.697
GSMUA_Achr4G11430_001 Musa acuminata GSMUA_Achr4G11430_001 I 0.745
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I 0.696
GSMUA_Achr6G00240_001 Musa acuminata GSMUA_Achr6G00240_001 I 0.678
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I 0.693
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.723
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.696
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.726
LPERR02G27530 Leersia perrieri LPERR02G27530 I 0.678
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.688
Lus10017907.g Linum usitatissimum Lus10017907.g I 0.696
Lus10029987.g Linum usitatissimum Lus10029987.g I 0.749
Lus10031526.g Linum usitatissimum Lus10031526.g I 0.719
Lus10035076.g Linum usitatissimum Lus10035076.g I 0.706
Lus10035329.g Linum usitatissimum Lus10035329.g I 0.749
MDP0000542633 Malus domestica MDP0000542633 I 0.796
MDP0000629527 Malus domestica MDP0000629527 I 0.796
MDP0000744693 Malus domestica MDP0000744693 I 0.817
MDP0000839828 Malus domestica MDP0000839828 I 0.779
mgf007166m Mimulus guttatus mgf007166m I 0.778
mgf016282m Mimulus guttatus mgf016282m I 0.779
mgf023367m Mimulus guttatus mgf023367m I 0.680
MTR_1g074310 Medicago truncatula MTR_1g074310 I 0.686
MTR_2g014300 Medicago truncatula MTR_2g014300 I 0.680
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.692
OBART02G33690 Oryza barthii OBART02G33690 I 0.679
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.718
OGLUM02G34120 Oryza glumaepatula OGLUM02G34120 I 0.679
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.718
OMERI02G32080 Oryza meridionalis OMERI02G32080 I 0.679
ONIVA02G33420 Oryza nivara ONIVA02G33420 I 0.679
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.726
OPUNC02G31100 Oryza punctata OPUNC02G31100 I 0.688
orange1.1g027990m.g Citrus sinensis orange1.1g027990m.g I 0.780
orange1.1g030994m.g Citrus sinensis orange1.1g030994m.g I 0.680
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.688
orange1.1g045783m.g Citrus sinensis orange1.1g045783m.g I 0.781
orange1.1g046280m.g Citrus sinensis orange1.1g046280m.g I 0.681
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.718
ORGLA02G0291300 Oryza glaberrima ORGLA02G0291300 I 0.679
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.718
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.732
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.732
Pavir.Da00220 Panicum virgatum Pavir.Da00220 I 0.683
Pavir.Eb03165 Panicum virgatum Pavir.Eb03165 I 0.682
Pavir.Fa01728 Panicum virgatum Pavir.Fa01728 I 0.688
Pavir.Fb00951 Panicum virgatum Pavir.Fb00951 I 0.688
Pavir.J13096 Panicum virgatum Pavir.J13096 I 0.677
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.714
PGSC0003DMG400014417 Solanum tuberosum PGSC0003DMG400014417 I 0.769
PGSC0003DMG400022305 Solanum tuberosum PGSC0003DMG400022305 I 0.773
PGSC0003DMG400029713 Solanum tuberosum PGSC0003DMG400029713 I 0.680
PK02998.1 Cannabis sativa PK02998.1 I 0.694
PK17878.1 Cannabis sativa PK17878.1 D 0.680
PK25211.1 Cannabis sativa PK25211.1 I 0.783
Pm010083 Prunus mume Pm010083 I 0.680
Pm011907 Prunus mume Pm011907 I 0.796
Pm014953 Prunus mume Pm014953 I 0.779
Pm017696 Prunus mume Pm017696 I 0.684
Pm017699 Prunus mume Pm017699 I 0.687
Pm020210 Prunus mume Pm020210 I 0.688
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I 0.773
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I 0.687
POPTR_0004s04700 Populus trichocarpa POPTR_0004s04700 I 0.680
POPTR_0011s05570 Populus trichocarpa POPTR_0011s05570 I 0.680
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I 0.681
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I 0.678
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.688
PRUPE_ppa010804mg Prunus persica PRUPE_ppa010804mg I 0.779
PRUPE_ppa010893mg Prunus persica PRUPE_ppa010893mg I 0.779
PRUPE_ppa012385mg Prunus persica PRUPE_ppa012385mg I 0.680
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.684
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I 0.688
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.684
SapurV1A.0007s0970 Salix purpurea SapurV1A.0007s0970 I 0.685
SapurV1A.0012s0570 Salix purpurea SapurV1A.0012s0570 I 0.680
SapurV1A.0032s0450 Salix purpurea SapurV1A.0032s0450 I 0.680
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.687
SapurV1A.0126s0320 Salix purpurea SapurV1A.0126s0320 I 0.761
SapurV1A.0126s0330 Salix purpurea SapurV1A.0126s0330 I 0.761
Sb03g037085 Sorghum bicolor Sb03g037085 I 0.685
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.732
SELMODRAFT_129122 Selaginella moellendorffii SELMODRAFT_129122 I 0.677
SELMODRAFT_17648 Selaginella moellendorffii SELMODRAFT_17648 I 0.677
SELMODRAFT_402810 Selaginella moellendorffii SELMODRAFT_402810 I 0.697
SELMODRAFT_430375 Selaginella moellendorffii SELMODRAFT_430375 I 0.679
SELMODRAFT_439762 Selaginella moellendorffii SELMODRAFT_439762 I 0.697
SELMODRAFT_443461 Selaginella moellendorffii SELMODRAFT_443461 I 0.679
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I 0.689
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I 0.689
SELMODRAFT_73143 Selaginella moellendorffii SELMODRAFT_73143 I 0.680
Solyc02g077840.1 Solanum lycopersicum Solyc02g077840.1 I 0.680
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.705
Solyc07g064890.1 Solanum lycopersicum Solyc07g064890.1 I 0.782
Solyc10g006130.1 Solanum lycopersicum Solyc10g006130.1 I 0.778
TCM_005706 Theobroma cacao TCM_005706 I 0.687
TCM_005707 Theobroma cacao TCM_005707 I 0.687
TCM_029823 Theobroma cacao TCM_029823 I 0.680
TCM_030804 Theobroma cacao TCM_030804 I 0.726
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.694
Thhalv10009947m.g Eutrema salsugineum Thhalv10009947m.g I 0.686
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.724
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.725
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I 0.686
VIT_05s0049g00500 Vitis vinifera VIT_05s0049g00500 I 0.682
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I 0.697
VIT_12s0059g01460 Vitis vinifera VIT_12s0059g01460 I 0.781
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I 0.695
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I 0.738