CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000243113
(
Malus domestica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
MDP0000243113
T009047_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF3
M01607_2.00
Arabidopsis thaliana
CGCCGSCR
YGSCGGCG
PBM
Weirauch et al.(2014)
pTH8109
0.716
0.851
ERF3
M06584_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
ERF3_col_a
0.716
0.851
ERF3
M06585_2.00
Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR
YGRCGGCGGHRNNDNHDDNN
Dap-seq
OMalley et al.(2016)
ERF3_colamp_a
0.716
0.851
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.702
0.809
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.702
0.809
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.702
0.809
ERF13
M01615_2.00
Arabidopsis thaliana
VGCCGSCD
HGSCGGCB
PBM
Weirauch et al.(2014)
pTH7283
0.694
0.723
ERF13
M06612_2.00
Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN
Dap-seq
OMalley et al.(2016)
ERF13_colamp_a
0.694
0.723
ERF13
M06613_2.00
Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD
Dap-seq
OMalley et al.(2016)
ERF13_col_b
0.694
0.723
PK17878.1
M01099_2.00
Cannabis sativa
CGCCGYCR
YGRCGGCG
PBM
Lambert et al.(2019)
pTH10133
0.680
0.787
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000243113
AP2
29
80
VRYRGVRRRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARILRGP
Links
Other
AP2
family TFs
Other
Malus domestica
TFs
241 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29640.m000403
Ricinus communis
29640.m000403
I
0.772
30174.m008755
Ricinus communis
30174.m008755
I
0.686
30174.m008756
Ricinus communis
30174.m008756
I
0.684
30190.m011323
Ricinus communis
30190.m011323
I
0.680
AMTR_s00002p00264660
Amborella trichopoda
AMTR_s00002p00264660
I
0.706
Aquca_017_00628
Aquilegia coerulea
Aquca_017_00628
I
0.686
Aquca_027_00311
Aquilegia coerulea
Aquca_027_00311
I
0.771
ATERF13
Arabidopsis lyrata
scaffold_403422.1
I
0.694
BGIOSGA005557
Oryza indica
BGIOSGA005557
I
0.679
Bo1g102220
Brassica oleracea
Bo1g102220
I
0.691
Bo3g074840
Brassica oleracea
Bo3g074840
I
0.680
Bo3g143340
Brassica oleracea
Bo3g143340
I
0.686
Bo4g024140
Brassica oleracea
Bo4g024140
I
0.694
Bo4g195220
Brassica oleracea
Bo4g195220
I
0.694
Bo5g055840
Brassica oleracea
Bo5g055840
I
0.686
Bo6g022410
Brassica oleracea
Bo6g022410
I
0.752
Bo7g040810
Brassica oleracea
Bo7g040810
I
0.688
Bo7g048190
Brassica oleracea
Bo7g048190
I
0.686
Bostr.15697s0156
Boechera stricta
Bostr.15697s0156
I
0.686
Bostr.26675s0113
Boechera stricta
Bostr.26675s0113
I
0.702
Bostr.26675s0318
Boechera stricta
Bostr.26675s0318
I
0.677
Bra001784
Brassica rapa
Bra001784
I
0.680
Bra004873
Brassica rapa
Bra004873
I
0.694
Bra010881
Brassica rapa
Bra010881
I
0.686
Bra014925
Brassica rapa
Bra014925
I
0.688
Bra018864
Brassica rapa
Bra018864
I
0.711
Bra023748
Brassica rapa
Bra023748
I
0.691
Bra030094
Brassica rapa
Bra030094
I
0.686
Bra032898
Brassica rapa
Bra032898
I
0.686
Bra037630
Brassica rapa
Bra037630
I
0.694
BRADI2G21067
Brachypodium distachyon
BRADI2G21067
I
0.677
BRADI3G06562
Brachypodium distachyon
BRADI3G06562
I
0.733
Cagra.0239s0035
Capsella grandiflora
Cagra.0239s0035
I
0.694
Cagra.0952s0001
Capsella grandiflora
Cagra.0952s0001
I
0.717
Cagra.1671s0052
Capsella grandiflora
Cagra.1671s0052
I
0.677
Cagra.1822s0023
Capsella grandiflora
Cagra.1822s0023
I
0.686
Carubv10010284m.g
Capsella rubella
Carubv10010284m.g
I
0.717
Carubv10011057m.g
Capsella rubella
Carubv10011057m.g
I
0.677
Carubv10011585m.g
Capsella rubella
Carubv10011585m.g
I
0.686
Carubv10023967m.g
Capsella rubella
Carubv10023967m.g
I
0.694
cassava19881.m1
Manihot esculenta
cassava19881.m1
I
0.681
cassava19882.m1
Manihot esculenta
cassava19882.m1
I
0.679
cassava19883.m1
Manihot esculenta
cassava19883.m1
I
0.687
cassava34729.m1
Manihot esculenta
cassava34729.m1
I
0.713
cassava42971.valid.m1
Manihot esculenta
cassava42971.valid.m1
I
0.680
cassava43266.valid.m1
Manihot esculenta
cassava43266.valid.m1
I
0.800
cassava4486.m1
Manihot esculenta
cassava4486.m1
I
0.680
cassava6588.valid.m1
Manihot esculenta
cassava6588.valid.m1
I
0.678
Ca_00326
Cicer arietinum
Ca_00326
I
0.680
Ca_12080
Cicer arietinum
Ca_12080
I
0.689
Ca_12205
Cicer arietinum
Ca_12205
I
0.694
Ca_17824
Cicer arietinum
Ca_17824
I
0.699
chr1.CM0375.170.nd
Lotus japonicus
chr1.CM0375.170.nd
I
0.696
chr2.LjT24P12.30.nd
Lotus japonicus
chr2.LjT24P12.30.nd
I
0.756
chr6.CM0114.130.nc
Lotus japonicus
chr6.CM0114.130.nc
I
0.680
Ciclev10006460m.g
Citrus clementina
Ciclev10006460m.g
I
0.681
Ciclev10009361m.g
Citrus clementina
Ciclev10009361m.g
I
0.781
Ciclev10016668m.g
Citrus clementina
Ciclev10016668m.g
I
0.780
Ciclev10016982m.g
Citrus clementina
Ciclev10016982m.g
I
0.680
Cla003319
Citrullus lanatus
Cla003319
I
0.735
Cla003678
Citrullus lanatus
Cla003678
I
0.679
Cla005423
Citrullus lanatus
Cla005423
I
0.741
Cla013723
Citrullus lanatus
Cla013723
I
0.714
Cla020002
Citrullus lanatus
Cla020002
I
0.680
Cucsa.042770
Cucumis sativus
Cucsa.042770
I
0.733
Cucsa.095860
Cucumis sativus
Cucsa.095860
I
0.681
Cucsa.126860
Cucumis sativus
Cucsa.126860
I
0.680
Cucsa.129330
Cucumis sativus
Cucsa.129330
I
0.683
Cucsa.139820
Cucumis sativus
Cucsa.139820
I
0.716
Cucsa.190200
Cucumis sativus
Cucsa.190200
I
0.735
Cucsa.255330
Cucumis sativus
Cucsa.255330
I
0.695
Cucsa.300100
Cucumis sativus
Cucsa.300100
I
0.686
ERF12
Arabidopsis thaliana
AT1G28360
I
0.686
ERF12
Arabidopsis lyrata
fgenesh2_kg.1__3004__AT1G28360.1
I
0.686
ERF12
Vitis vinifera
VIT_10s0003g00130
I
0.680
ERF13
Arabidopsis thaliana
AT2G44840
D
0.694
ERF3
Arabidopsis thaliana
AT1G50640
D
0.716
ERF3
Arabidopsis lyrata
fgenesh2_kg.1__4150__AT1G50640.1
I
0.702
ERF7
Arabidopsis thaliana
AT3G20310
D
0.702
estExt_fgeneshCV_pg.C_120242
Chlorella vulgaris
estExt_fgeneshCV_pg.C_120242
I
0.677
estExt_Genemark1.C_100079
Coccomyxa subellipsoidea C169
estExt_Genemark1.C_100079
I
0.677
estExt_gwp_gw1.C_1270048
Physcomitrella patens
estExt_gwp_gw1.C_1270048
I
0.697
Eucgr.A01091
Eucalyptus grandis
Eucgr.A01091
I
0.756
Eucgr.G00002
Eucalyptus grandis
Eucgr.G00002
I
0.699
Eucgr.G00390
Eucalyptus grandis
Eucgr.G00390
I
0.683
Eucgr.G00391
Eucalyptus grandis
Eucgr.G00391
I
0.683
Eucgr.G00393
Eucalyptus grandis
Eucgr.G00393
I
0.679
Eucgr.G00394
Eucalyptus grandis
Eucgr.G00394
I
0.678
Eucgr.G00396
Eucalyptus grandis
Eucgr.G00396
I
0.678
Eucgr.G00397
Eucalyptus grandis
Eucgr.G00397
I
0.685
evm.TU.supercontig_101.15
Carica papaya
evm.TU.supercontig_101.15
I
0.687
evm.TU.supercontig_12.251
Carica papaya
evm.TU.supercontig_12.251
I
0.778
evm.TU.supercontig_132.31
Carica papaya
evm.TU.supercontig_132.31
I
0.766
evm.TU.supercontig_27.18
Carica papaya
evm.TU.supercontig_27.18
I
0.680
evm.TU.supercontig_44.73
Carica papaya
evm.TU.supercontig_44.73
I
0.702
e_gw1.124.59.1
Physcomitrella patens
e_gw1.124.59.1
I
0.697
fgenesh1_pg.scaffold_6000034
Physcomitrella patens
fgenesh1_pg.scaffold_6000034
I
0.698
gene01152-v1.0-hybrid
Fragaria vesca
gene01152-v1.0-hybrid
I
0.779
gene03450-v1.0-hybrid
Fragaria vesca
gene03450-v1.0-hybrid
I
0.719
gene04913-v1.0-hybrid
Fragaria vesca
gene04913-v1.0-hybrid
I
0.694
gene04917-v1.0-hybrid
Fragaria vesca
gene04917-v1.0-hybrid
I
0.686
gene21403-v1.0-hybrid
Fragaria vesca
gene21403-v1.0-hybrid
I
0.689
gene29735-v1.0-hybrid
Fragaria vesca
gene29735-v1.0-hybrid
I
0.680
GLYMA02G43500
Glycine max
GLYMA02G43500
I
0.743
GLYMA02G46340
Glycine max
GLYMA02G46340
I
0.728
GLYMA03G31640
Glycine max
GLYMA03G31640
I
0.711
GLYMA06G44430
Glycine max
GLYMA06G44430
I
0.694
GLYMA10G23460
Glycine max
GLYMA10G23460
I
0.685
GLYMA10G33070
Glycine max
GLYMA10G33070
I
0.678
GLYMA12G13315
Glycine max
GLYMA12G13315
I
0.686
GLYMA13G31010
Glycine max
GLYMA13G31010
I
0.680
GLYMA14G02360
Glycine max
GLYMA14G02360
I
0.706
GLYMA14G05470
Glycine max
GLYMA14G05470
I
0.743
GLYMA15G08360
Glycine max
GLYMA15G08360
I
0.680
GLYMA20G16920
Glycine max
GLYMA20G16920
I
0.685
GLYMA20G34560
Glycine max
GLYMA20G34560
I
0.678
Gorai.001G252400
Gossypium raimondii
Gorai.001G252400
I
0.686
Gorai.002G092900
Gossypium raimondii
Gorai.002G092900
I
0.718
Gorai.007G086000
Gossypium raimondii
Gorai.007G086000
I
0.679
Gorai.007G312200
Gossypium raimondii
Gorai.007G312200
I
0.733
Gorai.008G155600
Gossypium raimondii
Gorai.008G155600
I
0.678
Gorai.009G443400
Gossypium raimondii
Gorai.009G443400
I
0.699
Gorai.011G029700
Gossypium raimondii
Gorai.011G029700
I
0.680
Gorai.013G169500
Gossypium raimondii
Gorai.013G169500
I
0.698
GRMZM2G079653
Zea mays
GRMZM2G079653
I
0.733
GRMZM2G103085
Zea mays
GRMZM2G103085
I
0.677
GRMZM2G146028
Zea mays
GRMZM2G146028
I
0.732
GSMUA_Achr1G18230_001
Musa acuminata
GSMUA_Achr1G18230_001
I
0.755
GSMUA_Achr3G13010_001
Musa acuminata
GSMUA_Achr3G13010_001
I
0.704
GSMUA_Achr3G29290_001
Musa acuminata
GSMUA_Achr3G29290_001
I
0.697
GSMUA_Achr4G04060_001
Musa acuminata
GSMUA_Achr4G04060_001
I
0.745
GSMUA_Achr4G06170_001
Musa acuminata
GSMUA_Achr4G06170_001
I
0.734
GSMUA_Achr4G06660_001
Musa acuminata
GSMUA_Achr4G06660_001
I
0.697
GSMUA_Achr4G11430_001
Musa acuminata
GSMUA_Achr4G11430_001
I
0.745
GSMUA_Achr5G09940_001
Musa acuminata
GSMUA_Achr5G09940_001
I
0.696
GSMUA_Achr6G00240_001
Musa acuminata
GSMUA_Achr6G00240_001
I
0.678
GSMUA_Achr6G01440_001
Musa acuminata
GSMUA_Achr6G01440_001
I
0.693
GSMUA_AchrUn_randomG06910_001
Musa acuminata
GSMUA_AchrUn_randomG06910_001
I
0.723
gw1.90.191.1
Physcomitrella patens
gw1.90.191.1
I
0.696
LPERR02G05920
Leersia perrieri
LPERR02G05920
I
0.726
LPERR02G27530
Leersia perrieri
LPERR02G27530
I
0.678
Lus10016212.g
Linum usitatissimum
Lus10016212.g
I
0.688
Lus10017907.g
Linum usitatissimum
Lus10017907.g
I
0.696
Lus10029987.g
Linum usitatissimum
Lus10029987.g
I
0.749
Lus10031526.g
Linum usitatissimum
Lus10031526.g
I
0.719
Lus10035076.g
Linum usitatissimum
Lus10035076.g
I
0.706
Lus10035329.g
Linum usitatissimum
Lus10035329.g
I
0.749
MDP0000542633
Malus domestica
MDP0000542633
I
0.796
MDP0000629527
Malus domestica
MDP0000629527
I
0.796
MDP0000744693
Malus domestica
MDP0000744693
I
0.817
MDP0000839828
Malus domestica
MDP0000839828
I
0.779
mgf007166m
Mimulus guttatus
mgf007166m
I
0.778
mgf016282m
Mimulus guttatus
mgf016282m
I
0.779
mgf023367m
Mimulus guttatus
mgf023367m
I
0.680
MTR_1g074310
Medicago truncatula
MTR_1g074310
I
0.686
MTR_2g014300
Medicago truncatula
MTR_2g014300
I
0.680
MTR_8g006815
Medicago truncatula
MTR_8g006815
I
0.692
OBART02G33690
Oryza barthii
OBART02G33690
I
0.679
OGLUM02G06860
Oryza glumaepatula
OGLUM02G06860
I
0.718
OGLUM02G34120
Oryza glumaepatula
OGLUM02G34120
I
0.679
OMERI02G07840
Oryza meridionalis
OMERI02G07840
I
0.718
OMERI02G32080
Oryza meridionalis
OMERI02G32080
I
0.679
ONIVA02G33420
Oryza nivara
ONIVA02G33420
I
0.679
OPUNC02G05940
Oryza punctata
OPUNC02G05940
I
0.726
OPUNC02G31100
Oryza punctata
OPUNC02G31100
I
0.688
orange1.1g027990m.g
Citrus sinensis
orange1.1g027990m.g
I
0.780
orange1.1g030994m.g
Citrus sinensis
orange1.1g030994m.g
I
0.680
orange1.1g044584m.g
Citrus sinensis
orange1.1g044584m.g
I
0.688
orange1.1g045783m.g
Citrus sinensis
orange1.1g045783m.g
I
0.781
orange1.1g046280m.g
Citrus sinensis
orange1.1g046280m.g
I
0.681
ORGLA02G0063000
Oryza glaberrima
ORGLA02G0063000
I
0.718
ORGLA02G0291300
Oryza glaberrima
ORGLA02G0291300
I
0.679
ORUFI02G06880
Oryza rufipogon
ORUFI02G06880
I
0.718
Pavir.Aa03102
Panicum virgatum
Pavir.Aa03102
I
0.732
Pavir.Ab00660
Panicum virgatum
Pavir.Ab00660
I
0.732
Pavir.Da00220
Panicum virgatum
Pavir.Da00220
I
0.683
Pavir.Eb03165
Panicum virgatum
Pavir.Eb03165
I
0.682
Pavir.Fa01728
Panicum virgatum
Pavir.Fa01728
I
0.688
Pavir.Fb00951
Panicum virgatum
Pavir.Fb00951
I
0.688
Pavir.J13096
Panicum virgatum
Pavir.J13096
I
0.677
PGSC0003DMG400000681
Solanum tuberosum
PGSC0003DMG400000681
I
0.714
PGSC0003DMG400014417
Solanum tuberosum
PGSC0003DMG400014417
I
0.769
PGSC0003DMG400022305
Solanum tuberosum
PGSC0003DMG400022305
I
0.773
PGSC0003DMG400029713
Solanum tuberosum
PGSC0003DMG400029713
I
0.680
PK02998.1
Cannabis sativa
PK02998.1
I
0.694
PK17878.1
Cannabis sativa
PK17878.1
D
0.680
PK25211.1
Cannabis sativa
PK25211.1
I
0.783
Pm010083
Prunus mume
Pm010083
I
0.680
Pm011907
Prunus mume
Pm011907
I
0.796
Pm014953
Prunus mume
Pm014953
I
0.779
Pm017696
Prunus mume
Pm017696
I
0.684
Pm017699
Prunus mume
Pm017699
I
0.687
Pm020210
Prunus mume
Pm020210
I
0.688
POPTR_0001s36610
Populus trichocarpa
POPTR_0001s36610
I
0.773
POPTR_0002s04430
Populus trichocarpa
POPTR_0002s04430
I
0.687
POPTR_0004s04700
Populus trichocarpa
POPTR_0004s04700
I
0.680
POPTR_0011s05570
Populus trichocarpa
POPTR_0011s05570
I
0.680
POPTR_0014s04600
Populus trichocarpa
POPTR_0014s04600
I
0.681
POPTR_0014s04610
Populus trichocarpa
POPTR_0014s04610
I
0.678
POPTR_0014s04640
Populus trichocarpa
POPTR_0014s04640
I
0.688
PRUPE_ppa010804mg
Prunus persica
PRUPE_ppa010804mg
I
0.779
PRUPE_ppa010893mg
Prunus persica
PRUPE_ppa010893mg
I
0.779
PRUPE_ppa012385mg
Prunus persica
PRUPE_ppa012385mg
I
0.680
PRUPE_ppa016903mg
Prunus persica
PRUPE_ppa016903mg
I
0.684
PRUPE_ppa022435mg
Prunus persica
PRUPE_ppa022435mg
I
0.688
PRUPE_ppb014367mg
Prunus persica
PRUPE_ppb014367mg
I
0.684
SapurV1A.0007s0970
Salix purpurea
SapurV1A.0007s0970
I
0.685
SapurV1A.0012s0570
Salix purpurea
SapurV1A.0012s0570
I
0.680
SapurV1A.0032s0450
Salix purpurea
SapurV1A.0032s0450
I
0.680
SapurV1A.0124s0170
Salix purpurea
SapurV1A.0124s0170
I
0.687
SapurV1A.0126s0320
Salix purpurea
SapurV1A.0126s0320
I
0.761
SapurV1A.0126s0330
Salix purpurea
SapurV1A.0126s0330
I
0.761
Sb03g037085
Sorghum bicolor
Sb03g037085
I
0.685
Sb04g006080
Sorghum bicolor
Sb04g006080
I
0.732
SELMODRAFT_129122
Selaginella moellendorffii
SELMODRAFT_129122
I
0.677
SELMODRAFT_17648
Selaginella moellendorffii
SELMODRAFT_17648
I
0.677
SELMODRAFT_402810
Selaginella moellendorffii
SELMODRAFT_402810
I
0.697
SELMODRAFT_430375
Selaginella moellendorffii
SELMODRAFT_430375
I
0.679
SELMODRAFT_439762
Selaginella moellendorffii
SELMODRAFT_439762
I
0.697
SELMODRAFT_443461
Selaginella moellendorffii
SELMODRAFT_443461
I
0.679
SELMODRAFT_49950
Selaginella moellendorffii
SELMODRAFT_49950
I
0.689
SELMODRAFT_73142
Selaginella moellendorffii
SELMODRAFT_73142
I
0.689
SELMODRAFT_73143
Selaginella moellendorffii
SELMODRAFT_73143
I
0.680
Solyc02g077840.1
Solanum lycopersicum
Solyc02g077840.1
I
0.680
Solyc07g049490.1
Solanum lycopersicum
Solyc07g049490.1
I
0.705
Solyc07g064890.1
Solanum lycopersicum
Solyc07g064890.1
I
0.782
Solyc10g006130.1
Solanum lycopersicum
Solyc10g006130.1
I
0.778
TCM_005706
Theobroma cacao
TCM_005706
I
0.687
TCM_005707
Theobroma cacao
TCM_005707
I
0.687
TCM_029823
Theobroma cacao
TCM_029823
I
0.680
TCM_030804
Theobroma cacao
TCM_030804
I
0.726
Thhalv10001758m.g
Eutrema salsugineum
Thhalv10001758m.g
I
0.694
Thhalv10009947m.g
Eutrema salsugineum
Thhalv10009947m.g
I
0.686
Thhalv10011689m.g
Eutrema salsugineum
Thhalv10011689m.g
I
0.724
Thhalv10021393m.g
Eutrema salsugineum
Thhalv10021393m.g
I
0.725
Thhalv10022108m.g
Eutrema salsugineum
Thhalv10022108m.g
I
0.686
VIT_05s0049g00500
Vitis vinifera
VIT_05s0049g00500
I
0.682
VIT_07s0141g00690
Vitis vinifera
VIT_07s0141g00690
I
0.697
VIT_12s0059g01460
Vitis vinifera
VIT_12s0059g01460
I
0.781
VIT_14s0081g00520
Vitis vinifera
VIT_14s0081g00520
I
0.695
VIT_19s0090g01080
Vitis vinifera
VIT_19s0090g01080
I
0.738