SKUD_205603 (Saccharomyces kudriavzevii)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 SKUD_205603 T012333_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHD1
M00006_2.00 		Saccharomyces cerevisiae
GMTGCAKG
CMTGCAKC		 PBM
Badis et al.(2008)
PHD1_4559 		0.773 0.929
PHD1
M01516_2.00 		Saccharomyces cerevisiae
NBMTGCANN
NNTGCAKVN		 PBM
Zhu et al.(2009)
Phd1 		0.773 0.929
PHD1
M07437_2.00 		Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0355.1 		0.773 0.929
PHD1
M07547_2.00 		Saccharomyces cerevisiae
VCACACCCACACMCCACACMCNNMCVCH
DGBGKNNGKGTGTGGKGTGTGGGTGTGB		 ChIP-exo
Rhee et al.(2011)
Phd1_1 		0.773 0.929
PHD1
M07548_2.00 		Saccharomyces cerevisiae
MYGCRC
GYGCRK		 ChIP-exo
Rhee et al.(2011)
Phd1_2 		0.773 0.929
PHD1
M07549_2.00 		Saccharomyces cerevisiae
TAGCCGCCGAR
YTCGGCGGCTA		 ChIP-exo
Rhee et al.(2011)
Phd1_3 		0.773 0.929
PHD1
M08475_2.00 		Saccharomyces cerevisiae
SCNGCRGG
CCYGCNGS		 Misc
DeBoer et al.(2011)
YKL043W_393 		0.773 0.929
PHD1
M08476_2.00 		Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN		 Misc
DeBoer et al.(2011)
YKL043W_554 		0.773 0.929
HCAG_07413
M01651_2.00 		Histoplasma capsulatum
NNNHRYDNNN
NNNHRYDNNN		 PBM
Weirauch et al.(2014)
pTH9346 		0.664 0.750
SOK2
M00007_2.00 		Saccharomyces cerevisiae
NCMTGCAKGNN
NNCMTGCAKGN		 PBM
Badis et al.(2008)
SOK2_4560 		0.659 0.810
SOK2
M07438_2.00 		Saccharomyces cerevisiae
NNBMTGCAKNN
NNMTGCAKVNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0385.1 		0.659 0.810
SOK2
M08477_2.00 		Saccharomyces cerevisiae
HNBCTGCR
YGCAGVND		 Misc
DeBoer et al.(2011)
YMR016C_404 		0.659 0.810
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT43134 APSES 199 287

Links

Other APSES family TFs
Other Saccharomyces kudriavzevii TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
13508_YKL043W Saccharomyces mikatae 13508_YKL043W I 0.759
13647_YKL043W Saccharomyces paradoxus 13647_YKL043W I 0.766
14607_YKL043W Saccharomyces bayanus 14607_YKL043W I 0.817
16462_YMR016C Saccharomyces mikatae 16462_YMR016C I 0.687
17269_YMR016C Saccharomyces paradoxus 17269_YMR016C I 0.659
17689_YMR016C Saccharomyces bayanus 17689_YMR016C I 0.693
AACERI_AaceriABR055C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR055C I 0.681
AGOS_ABR055C Ashbya gossypii AGOS_ABR055C I 0.681
AOL_s00083g25 Arthrobotrys oligospora AOL_s00083g25 I 0.657
BDDG_09856 Blastomyces dermatitidis BDDG_09856 I 0.664
BN7_6724 Wickerhamomyces ciferrii BN7_6724 I 0.674
CAGL0L01771g Candida glabrata CAGL0L01771g I 0.711
CaO19.610 Candida albicans CaO19.610 I 0.693
CaO19.8243 Candida albicans CaO19.8243 I 0.693
CD36_33560 Candida dubliniensis CD36_33560 I 0.693
CLUG_02047 Candida lusitaniae CLUG_02047 I 0.674
CLUG_02047 Clavispora lusitaniae CLUG_02047 I 0.674
CORT_0G01760 Candida orthopsilosis CORT_0G01760 I 0.693
CPAG_00178 Candida parapsilosis CPAG_00178 I 0.693
DEHA2E10978g Debaryomyces hansenii DEHA2E10978g I 0.693
Ecym_4584 Eremothecium cymbalariae Ecym_4584 I 0.661
estExt_fgenesh1_pg.C_chr_3.10654 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10654 I 0.693
G210_4810 Candida maltosa G210_4810 I 0.693
GNLVRS01_PISO0E14370g Millerozyma farinosa GNLVRS01_PISO0E14370g I 0.693
GNLVRS01_PISO0F15757g Millerozyma farinosa GNLVRS01_PISO0F15757g I 0.693
HCAG_07413 Histoplasma capsulatum HCAG_07413 D 0.664
HCBG_04638 Histoplasma capsulatum HCBG_04638 I 0.664
HPODL_01835 Ogataea parapolymorpha HPODL_01835 I 0.664
HPODL_04965 Ogataea parapolymorpha HPODL_04965 I 0.726
JL09_g3139 Pichia kudriavzevii JL09_g3139 I 0.670
KAFR_0A02120 Kazachstania africana KAFR_0A02120 I 0.720
KAFR_0B01410 Kazachstania africana KAFR_0B01410 I 0.750
KLLA0_F04840g Kluyveromyces lactis KLLA0_F04840g I 0.678
KUCA_T00004103001 Kuraishia capsulata KUCA_T00004103001 I 0.703
Kwal_8176 Kluyveromyces waltii Kwal_8176 I 0.659
LELG_05390 Lodderomyces elongisporus LELG_05390 I 0.680
NCAS_0A04710 Naumovozyma castellii NCAS_0A04710 I 0.683
NDAI_0K01760 Naumovozyma dairenensis NDAI_0K01760 I 0.675
PAS_chr1-4_0530 Komagataella pastoris PAS_chr1-4_0530 I 0.697
PGUG_03651 Candida guilliermondii PGUG_03651 I 0.693
PGUG_03651 Meyerozyma guilliermondii PGUG_03651 I 0.693
PHD1 Saccharomyces cerevisiae YKL043W D 0.773
PICST_67427 Scheffersomyces stipitis PICST_67427 I 0.693
SAKL0D13442g Lachancea kluyveri SAKL0D13442g I 0.666
Scas_Contig625.8 Saccharomyces castellii Scas_Contig625.8 I 0.683
SKUD_205409 Saccharomyces kudriavzevii SKUD_205409 I 0.680
SOK2 Saccharomyces cerevisiae YMR016C D 0.659
SPAPADRAFT_59209 Spathaspora passalidarum SPAPADRAFT_59209 I 0.693
SU7_2011 Saccharomyces arboricola SU7_2011 I 0.726
SU7_2504 Saccharomyces arboricola SU7_2504 I 0.651
XP_002490663.1 Pichia pastoris XP_002490663.1 I 0.697
ZBAI_03487 Zygosaccharomyces bailii ZBAI_03487 I 0.651
ZBAI_08486 Zygosaccharomyces bailii ZBAI_08486 I 0.651
ZYRO0E06248g Zygosaccharomyces rouxii ZYRO0E06248g I 0.652