estExt_fgenesh1_pg.C_chr_3.10654 (Pichia stipitis)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 estExt_fgenesh1_pg.C_chr_3.10654 T013908_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SOK2
M00007_2.00 		Saccharomyces cerevisiae
NCMTGCAKGNN
NNCMTGCAKGN		 PBM
Badis et al.(2008)
SOK2_4560 		0.707 0.805
SOK2
M07438_2.00 		Saccharomyces cerevisiae
NNBMTGCAKNN
NNMTGCAKVNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0385.1 		0.707 0.805
SOK2
M08477_2.00 		Saccharomyces cerevisiae
HNBCTGCR
YGCAGVND		 Misc
DeBoer et al.(2011)
YMR016C_404 		0.707 0.805
PHD1
M00006_2.00 		Saccharomyces cerevisiae
GMTGCAKG
CMTGCAKC		 PBM
Badis et al.(2008)
PHD1_4559 		0.687 0.793
PHD1
M01516_2.00 		Saccharomyces cerevisiae
NBMTGCANN
NNTGCAKVN		 PBM
Zhu et al.(2009)
Phd1 		0.687 0.793
PHD1
M07437_2.00 		Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0355.1 		0.687 0.793
PHD1
M07547_2.00 		Saccharomyces cerevisiae
VCACACCCACACMCCACACMCNNMCVCH
DGBGKNNGKGTGTGGKGTGTGGGTGTGB		 ChIP-exo
Rhee et al.(2011)
Phd1_1 		0.687 0.793
PHD1
M07548_2.00 		Saccharomyces cerevisiae
MYGCRC
GYGCRK		 ChIP-exo
Rhee et al.(2011)
Phd1_2 		0.687 0.793
PHD1
M07549_2.00 		Saccharomyces cerevisiae
TAGCCGCCGAR
YTCGGCGGCTA		 ChIP-exo
Rhee et al.(2011)
Phd1_3 		0.687 0.793
PHD1
M08475_2.00 		Saccharomyces cerevisiae
SCNGCRGG
CCYGCNGS		 Misc
DeBoer et al.(2011)
YKL043W_393 		0.687 0.793
PHD1
M08476_2.00 		Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN		 Misc
DeBoer et al.(2011)
YKL043W_554 		0.687 0.793
HCAG_07413
M01651_2.00 		Histoplasma capsulatum
NNNHRYDNNN
NNNHRYDNNN		 PBM
Weirauch et al.(2014)
pTH9346 		0.669 0.759
e_gw1.5.76.1
M01652_2.00 		Nectria haematococca
NNVTGCABNN
NNVTGCABNN		 PBM
Weirauch et al.(2014)
pTH9267 		0.655 0.724
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_chr_3.10654 APSES 187 278

Links

Other APSES family TFs
Other Pichia stipitis TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
13508_YKL043W Saccharomyces mikatae 13508_YKL043W I 0.661
13647_YKL043W Saccharomyces paradoxus 13647_YKL043W I 0.669
14607_YKL043W Saccharomyces bayanus 14607_YKL043W I 0.667
16462_YMR016C Saccharomyces mikatae 16462_YMR016C I 0.678
17269_YMR016C Saccharomyces paradoxus 17269_YMR016C I 0.707
17689_YMR016C Saccharomyces bayanus 17689_YMR016C I 0.684
AACERI_AaceriABR055C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR055C I 0.784
ACLA_079840 Aspergillus clavatus CADACLAG00007685 I 0.655
ACRE_033420 Acremonium chrysogenum ACRE_033420 I 0.655
AFUA_2G07900 Aspergillus fumigatus CADAFUAG00004724 I 0.655
AGOS_ABR055C Ashbya gossypii AGOS_ABR055C I 0.784
AOL_s00083g25 Arthrobotrys oligospora AOL_s00083g25 I 0.655
Asm-1 Neurospora crassa NCU01414 I 0.655
ATEG_09634 Aspergillus terreus CADATEAG00005510 I 0.665
BDDG_09856 Blastomyces dermatitidis BDDG_09856 I 0.669
BN7_6724 Wickerhamomyces ciferrii BN7_6724 I 0.832
CADAFLAG00006026 Aspergillus flavus CADAFLAG00006026 I 0.655
CADANGAG00004797 Aspergillus niger CADANGAG00004797 I 0.655
CADAORAG00005595 Aspergillus oryzae CADAORAG00005595 I 0.655
CAGL0L01771g Candida glabrata CAGL0L01771g I 0.717
CaO19.610 Candida albicans CaO19.610 I 0.868
CaO19.8243 Candida albicans CaO19.8243 I 0.868
CD36_33560 Candida dubliniensis CD36_33560 I 0.868
CFIO01_13346 Colletotrichum fioriniae CFIO01_13346 I 0.655
CGGC5_9424 Colletotrichum gloeosporioides CGGC5_9424 I 0.655
CH063_08806 Colletotrichum higginsianum CH063_08806 I 0.655
CHGG_00576 Chaetomium globosum CHGG_00576 I 0.655
CIMG_00904 Coccidioides immitis CIMG_00904 I 0.655
CLUG_02047 Candida lusitaniae CLUG_02047 I 0.850
CLUG_02047 Clavispora lusitaniae CLUG_02047 I 0.850
Cob_09448 Colletotrichum orbiculare Cob_09448 I 0.655
COCC4DRAFT_44406 Bipolaris maydis COCC4DRAFT_44406 I 0.656
COCCADRAFT_26917 Bipolaris zeicola COCCADRAFT_26917 I 0.656
COCMIDRAFT_103135 Bipolaris oryzae COCMIDRAFT_103135 I 0.656
COCSADRAFT_302496 Bipolaris sorokiniana COCSADRAFT_302496 I 0.656
COCVIDRAFT_16107 Bipolaris victoriae COCVIDRAFT_16107 I 0.656
CORT_0G01760 Candida orthopsilosis CORT_0G01760 I 0.868
CPAG_00178 Candida parapsilosis CPAG_00178 I 0.868
CPC735_054280 Coccidioides posadasii CPC735_054280 I 0.655
CPUR_06267 Claviceps purpurea CPUR_06267 I 0.655
CSUB01_00783 Colletotrichum sublineola CSUB01_00783 I 0.655
DEHA2E10978g Debaryomyces hansenii DEHA2E10978g I 0.868
DRE_03961 Drechslerella stenobrocha DRE_03961 I 0.655
Ecym_4584 Eremothecium cymbalariae Ecym_4584 I 0.752
EPUS_07300 Endocarpon pusillum EPUS_07300 I 0.655
estExt_fgenesh1_pg.C_220129 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_220129 I 0.656
estExt_fgenesh2_pg.C_10649 Neurospora discreta estExt_fgenesh2_pg.C_10649 I 0.655
EURHEDRAFT_451308 Aspergillus ruber EURHEDRAFT_451308 I 0.653
EV44_g0662 Erysiphe necator EV44_g0662 I 0.660
e_gw1.5.76.1 Nectria haematococca e_gw1.5.76.1 D 0.655
e_gw1.7.880.1 Cryphonectria parasitica e_gw1.7.880.1 I 0.655
FGRRES_10129 Fusarium graminearum FGRRES_10129 I 0.655
FPSE_02622 Fusarium pseudograminearum FPSE_02622 I 0.655
G210_4810 Candida maltosa G210_4810 I 0.868
GGTG_14065 Gaeumannomyces graminis GGTG_14065 I 0.655
GLRG_04290 Colletotrichum graminicola GLRG_04290 I 0.655
GNLVRS01_PISO0E14370g Millerozyma farinosa GNLVRS01_PISO0E14370g I 0.868
GNLVRS01_PISO0F15757g Millerozyma farinosa GNLVRS01_PISO0F15757g I 0.868
GSTUM_00005509001 Tuber melanosporum GSTUM_00005509001 I 0.655
H072_1771 Dactylellina haptotyla H072_1771 I 0.655
HCAG_07413 Histoplasma capsulatum HCAG_07413 D 0.669
HCBG_04638 Histoplasma capsulatum HCBG_04638 I 0.669
HPODL_01835 Ogataea parapolymorpha HPODL_01835 I 0.763
HPODL_04965 Ogataea parapolymorpha HPODL_04965 I 0.760
JL09_g3139 Pichia kudriavzevii JL09_g3139 I 0.693
KAFR_0A02120 Kazachstania africana KAFR_0A02120 I 0.687
KAFR_0B01410 Kazachstania africana KAFR_0B01410 I 0.712
KLLA0_F04840g Kluyveromyces lactis KLLA0_F04840g I 0.751
KLTH0D07876g Lachancea thermotolerans KLTH0D07876g I 0.709
KLTH0D07876g Kluyveromyces thermotolerans KLTH0D07876g I 0.709
KUCA_T00004103001 Kuraishia capsulata KUCA_T00004103001 I 0.821
Kwal_8176 Kluyveromyces waltii Kwal_8176 I 0.778
LALA0_S02e00628g Lachancea lanzarotensis LALA0_S02e00628g I 0.764
LELG_05390 Lodderomyces elongisporus LELG_05390 I 0.855
LEMA_P011910.1 Leptosphaeria maculans LEMA_P011910.1 I 0.656
MAJ_05255 Metarhizium majus MAJ_05255 I 0.655
MAM_05111 Metarhizium album MAM_05111 I 0.655
MANI_024223 Metarhizium anisopliae MANI_024223 I 0.655
MAPG_07556 Magnaporthe poae MAPG_07556 I 0.655
MBR_04259 Metarhizium brunneum MBR_04259 I 0.655
MGU_05003 Metarhizium guizhouense MGU_05003 I 0.655
MYCTH_93313 Myceliophthora thermophila MYCTH_93313 I 0.655
NCAS_0A04710 Naumovozyma castellii NCAS_0A04710 I 0.659
NechaG41703 Fusarium solani NechaG41703 I 0.655
NEUTE1DRAFT_115825 Neurospora tetrasperma NEUTE1DRAFT_115825 I 0.655
NFIA_083590 Neosartorya fischeri CADNFIAG00007975 I 0.655
OCS_03868 Ophiocordyceps sinensis OCS_03868 I 0.655
PAS_chr1-4_0530 Komagataella pastoris PAS_chr1-4_0530 I 0.786
PFICI_06302 Pestalotiopsis fici PFICI_06302 I 0.655
PGUG_03651 Candida guilliermondii PGUG_03651 I 0.856
PGUG_03651 Meyerozyma guilliermondii PGUG_03651 I 0.856
PHD1 Saccharomyces cerevisiae YKL043W D 0.687
PICST_67427 Scheffersomyces stipitis PICST_67427 I 0.880
PMAA_070290 Talaromyces marneffei PMAA_070290 I 0.655
PMAA_070290 Penicillium marneffei PMAA_070290 I 0.655
PODANS_2_890 Podospora anserina PODANS_2_890 I 0.655
PTRG_01883 Pyrenophora triticirepentis PTRG_01883 I 0.656
PTT_19958 Pyrenophora teres PTT_19958 I 0.656
PV09_05716 Verruconis gallopava PV09_05716 I 0.656
SAKL0D13442g Lachancea kluyveri SAKL0D13442g I 0.761
SAPIO_CDS10609 Scedosporium apiospermum SAPIO_CDS10609 I 0.655
Scas_Contig625.8 Saccharomyces castellii Scas_Contig625.8 I 0.659
SETTUDRAFT_91357 Setosphaeria turcica SETTUDRAFT_91357 I 0.656
SKUD_205409 Saccharomyces kudriavzevii SKUD_205409 I 0.684
SKUD_205603 Saccharomyces kudriavzevii SKUD_205603 I 0.693
SMAC_08389 Sordaria macrospora SMAC_08389 I 0.655
SNOG_14941 Stagonospora nodorum SNOG_14941 I 0.656
SNOG_14941 Phaeosphaeria nodorum SNOG_14941 I 0.656
SOK2 Saccharomyces cerevisiae YMR016C D 0.707
SPAPADRAFT_59209 Spathaspora passalidarum SPAPADRAFT_59209 I 0.868
SU7_2504 Saccharomyces arboricola SU7_2504 I 0.713
TDEL_0B06530 Torulaspora delbrueckii TDEL_0B06530 I 0.659
TRIATDRAFT_163709 Trichoderma atroviride TRIATDRAFT_163709 I 0.655
TRIREDRAFT_74531 Trichoderma reesei TRIREDRAFT_74531 I 0.655
TRIVIDRAFT_133620 Trichoderma virens TRIVIDRAFT_133620 I 0.655
TSTA_090620 Talaromyces stipitatus TSTA_090620 I 0.655
UCRPA7_4586 Togninia minima UCRPA7_4586 I 0.655
UV8b_6148 Ustilaginoidea virens UV8b_6148 I 0.655
VHEMI10191 Torrubiella hemipterigena VHEMI10191 I 0.655
W97_03035 Coniosporium apollinis W97_03035 I 0.656
XP_002490663.1 Pichia pastoris XP_002490663.1 I 0.786
YALI0_B19602g Yarrowia lipolytica YALI0_B19602g I 0.678
YALI0_D01573g Yarrowia lipolytica YALI0_D01573g I 0.687
ZBAI_03487 Zygosaccharomyces bailii ZBAI_03487 I 0.678
ZBAI_08486 Zygosaccharomyces bailii ZBAI_08486 I 0.678
ZYRO0E06248g Zygosaccharomyces rouxii ZYRO0E06248g I 0.668