CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT1G51120
(
Arabidopsis thaliana
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
AT1G51120
T018401_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT1G51120
M01696_2.00
Arabidopsis thaliana
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH8659
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01696_2.00
B3
178
286
FQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRAMRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVFYTCDVPNNVKTLEGQ
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G51120.1
B3
178
286
FQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRAMRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVFYTCDVPNNVKTLEGQ
Links
Other
B3
family TFs
Other
Arabidopsis thaliana
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G50680
Arabidopsis thaliana
AT1G50680
I
0.927
Bo5g081270
Brassica oleracea
Bo5g081270
I
0.760
Bo6g022280
Brassica oleracea
Bo6g022280
I
0.758
Bo6g022450
Brassica oleracea
Bo6g022450
I
0.798
Bo6g024770
Brassica oleracea
Bo6g024770
I
0.865
Bostr.26675s0076
Boechera stricta
Bostr.26675s0076
I
0.948
Bostr.26675s0109
Boechera stricta
Bostr.26675s0109
I
0.906
Bra018854
Brassica rapa
Bra018854
I
0.742
Bra018869
Brassica rapa
Bra018869
I
0.742
Bra030458
Brassica rapa
Bra030458
I
0.771
Cagra.2093s0004
Capsella grandiflora
Cagra.2093s0004
I
0.823
Carubv10011257m.g
Capsella rubella
Carubv10011257m.g
I
0.885
Carubv10011592m.g
Capsella rubella
Carubv10011592m.g
I
0.823
Cla004867
Citrullus lanatus
Cla004867
I
0.705
Cucsa.142990
Cucumis sativus
Cucsa.142990
I
0.720
fgenesh2_kg.1__4154__AT1G50680.1
Arabidopsis lyrata
fgenesh2_kg.1__4154__AT1G50680.1
I
0.928
fgenesh2_kg.1__4181__AT1G51120.1
Arabidopsis lyrata
fgenesh2_kg.1__4181__AT1G51120.1
I
0.990
TCM_040397
Theobroma cacao
TCM_040397
I
0.796
Thhalv10012152m.g
Eutrema salsugineum
Thhalv10012152m.g
I
0.865
Thhalv10012161m.g
Eutrema salsugineum
Thhalv10012161m.g
I
0.740
Thhalv10012356m.g
Eutrema salsugineum
Thhalv10012356m.g
I
0.885
Traes_2DL_896E50180
Triticum aestivum
Traes_2DL_896E50180
I
0.714