Bo00285s530 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo00285s530 T018575_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.949 0.949
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.949 0.949
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo00285s530.1 B3 95 197

Links

Other B3 family TFs
Other Brassica oleracea TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30131.m006860 Ricinus communis 30131.m006860 I 0.838
Bo7g083910 Brassica oleracea Bo7g083910 I 0.768
Bostr.0556s0351 Boechera stricta Bostr.0556s0351 I 0.949
Bra032953 Brassica rapa Bra032953 I 1.000
Cagra.1841s0002 Capsella grandiflora Cagra.1841s0002 I 0.919
Carubv10019353m.g Capsella rubella Carubv10019353m.g I 0.919
cassava11393.m1 Manihot esculenta cassava11393.m1 I 0.814
cassava14836.m1 Manihot esculenta cassava14836.m1 I 0.793
Ca_05976 Cicer arietinum Ca_05976 I 0.806
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I 0.888
Cla009252 Citrullus lanatus Cla009252 I 0.857
evm.TU.supercontig_70.84 Carica papaya evm.TU.supercontig_70.84 I 0.762
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I 0.939
FUS3 Arabidopsis thaliana AT3G26790 D 0.949
FUS3 Vitis vinifera VIT_14s0068g01290 I 0.737
GLYMA16G05480 Glycine max GLYMA16G05480 I 0.837
GLYMA19G27336 Glycine max GLYMA19G27336 I 0.847
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I 0.837
LjSGA_037319.1 Lotus japonicus LjSGA_037319.1 I 0.882
Lus10012572.g Linum usitatissimum Lus10012572.g I 0.827
Lus10041521.g Linum usitatissimum Lus10041521.g I 0.837
MDP0000268649 Malus domestica MDP0000268649 I 0.836
MTR_7g083700 Medicago truncatula MTR_7g083700 I 0.804
orange1.1g041864m.g Citrus sinensis orange1.1g041864m.g I 0.869
Pm016099 Prunus mume Pm016099 I 0.878
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I 0.833
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I 0.857
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I 0.867
TCM_017321 Theobroma cacao TCM_017321 I 0.847
Thhalv10005481m.g Eutrema salsugineum Thhalv10005481m.g I 0.939