CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA04G0270000
(
Oryza glaberrima
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
ORGLA04G0270000
T020484_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA04G0270000.1
B3
122
228
YAKQLTQSDANNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAA
Links
Other
B3
family TFs
Other
Oryza glaberrima
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00023p00044590
Amborella trichopoda
AMTR_s00023p00044590
I
0.000
Bo9g177130
Brassica oleracea
Bo9g177130
I
0.000
BRADI2G29960
Brachypodium distachyon
BRADI2G29960
I
0.000
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
0.000
F775_32062
Aegilops tauschii
F775_32062
I
0.000
GLYMA06G45680
Glycine max
GLYMA06G45680
I
0.000
GLYMA12G11150
Glycine max
GLYMA12G11150
I
0.000
GLYMA12G32400
Glycine max
GLYMA12G32400
I
0.000
GLYMA13G38030
Glycine max
GLYMA13G38030
I
0.000
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
0.000
LPERR05G09930
Leersia perrieri
LPERR05G09930
I
0.000
MLOC_77405
Hordeum vulgare
MLOC_77405
I
0.000
OB05G20700
Oryza brachyantha
OB05G20700
I
0.000
OBART05G12580
Oryza barthii
OBART05G12580
I
0.000
OGLUM05G13290
Oryza glumaepatula
OGLUM05G13290
I
0.000
OLONG_017780
Oryza longistaminata
OLONG_017780
I
0.000
OMERI05G11290
Oryza meridionalis
OMERI05G11290
I
0.000
ONIVA05G13030
Oryza nivara
ONIVA05G13030
I
0.000
OPUNC05G10700
Oryza punctata
OPUNC05G10700
I
0.000
ORGLA05G0107600
Oryza glaberrima
ORGLA05G0107600
I
0.000
ORUFI05G13560
Oryza rufipogon
ORUFI05G13560
I
0.000
PK07402.1
Cannabis sativa
PK07402.1
D
0.000
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
0.000
Q84JE9_HORVU
Hordeum vulgare
Q84JE9_HORVU
D
0.000
Q84ND8_HORVU
Hordeum vulgare
Q84ND8_HORVU
D
0.000
SapurV1A.0133s0330
Salix purpurea
SapurV1A.0133s0330
I
0.000
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
0.000
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
0.000
Thhalv10016913m.g
Eutrema salsugineum
Thhalv10016913m.g
I
0.000
Traes_1AL_A9FB6BF52
Triticum aestivum
Traes_1AL_A9FB6BF52
I
0.000
Traes_1BL_BDF0801D01
Triticum aestivum
Traes_1BL_BDF0801D01
I
0.000
TRIUR3_17409
Triticum urartu
TRIUR3_17409
I
0.000