TCM_015590 (Theobroma cacao)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 TCM_015590 T021512_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY23814 B3 161 266

Links

Other B3 family TFs
Other Theobroma cacao TFs

316 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30068.m002615 Ricinus communis 30068.m002615 I 0.891
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.792
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.842
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.851
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.861
Cagra.11546s0001 Capsella grandiflora Cagra.11546s0001 I 0.000
Carubv10010429m.g Capsella rubella Carubv10010429m.g I 0.000
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.921
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.891
Ca_01368 Cicer arietinum Ca_01368 I 0.871
Cla006845 Citrullus lanatus Cla006845 I 0.822
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.851
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.832
Eucgr.B03050 Eucalyptus grandis Eucgr.B03050 I 0.000
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.921
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.990
F775_20738 Aegilops tauschii F775_20738 I 0.000
F775_22332 Aegilops tauschii F775_22332 I 0.000
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.881
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.980
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.941
GRMZM2G018336 Zea mays GRMZM2G018336 I 0.000
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.842
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.802
GRMZM2G065538 Zea mays GRMZM2G065538 I 0.000
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.842
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.782
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.842
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.842
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.851
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.713
mgf023686m Mimulus guttatus mgf023686m I 0.723
MLOC_38822 Hordeum vulgare MLOC_38822 I 0.703
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.714
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.861
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.901
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.911
OB01G36520 Oryza brachyantha OB01G36520 I 0.701
OB02G35380 Oryza brachyantha OB02G35380 I 0.871
OB05G32250 Oryza brachyantha OB05G32250 I 0.703
OBART02G28100 Oryza barthii OBART02G28100 N 0.842
OBART04G22880 Oryza barthii OBART04G22880 I 0.861
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.842
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.861
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.711
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.842
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.851
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.842
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.842
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.842
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.861
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.842
OS02G0683500 Oryza sativa OS02G0683500 N 0.842
OS04G0581400 Oryza sativa OS04G0581400 I 0.861
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.802
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.762
Pavir.Ea00485 Panicum virgatum Pavir.Ea00485 I 0.000
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.990
Pm024248 Prunus mume Pm024248 I 0.990
Pm028725 Prunus mume Pm028725 N 0.871
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.861
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.990
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.802
Si020241m.g Setaria italica Si020241m.g N 0.762
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.970
TCM_005014 Theobroma cacao TCM_005014 I 0.970
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.703
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.703
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.851
Traes_3AS_2E5380A2A Triticum aestivum Traes_3AS_2E5380A2A I 0.000
Traes_3AS_82DEC629B Triticum aestivum Traes_3AS_82DEC629B N 0.000
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.851
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.861
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.861
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.784
TRIUR3_10777 Triticum urartu TRIUR3_10777 N 0.000
TRIUR3_24850 Triticum urartu TRIUR3_24850 I 0.000