TCM_040397 (Theobroma cacao)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 TCM_040397 T021546_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G51120
M01696_2.00 		Arabidopsis thaliana
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH8659 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY32454 B3 171 274

Links

Other B3 family TFs
Other Theobroma cacao TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G50680 Arabidopsis thaliana AT1G50680 I 0.774
AT1G51120 Arabidopsis thaliana AT1G51120 D 0.796
Bo6g022280 Brassica oleracea Bo6g022280 I 0.710
Bo6g024770 Brassica oleracea Bo6g024770 I 0.710
Bostr.26675s0076 Boechera stricta Bostr.26675s0076 I 0.796
Bostr.26675s0109 Boechera stricta Bostr.26675s0109 I 0.753
Bra018854 Brassica rapa Bra018854 I 0.720
Cagra.2093s0004 Capsella grandiflora Cagra.2093s0004 I 0.774
Carubv10011257m.g Capsella rubella Carubv10011257m.g I 0.742
Carubv10011592m.g Capsella rubella Carubv10011592m.g I 0.774
Cla004867 Citrullus lanatus Cla004867 I 0.716
Cucsa.142990 Cucumis sativus Cucsa.142990 I 0.720
fgenesh2_kg.1__4154__AT1G50680.1 Arabidopsis lyrata fgenesh2_kg.1__4154__AT1G50680.1 I 0.742
fgenesh2_kg.1__4181__AT1G51120.1 Arabidopsis lyrata fgenesh2_kg.1__4181__AT1G51120.1 I 0.796
Thhalv10012152m.g Eutrema salsugineum Thhalv10012152m.g I 0.720
Thhalv10012356m.g Eutrema salsugineum Thhalv10012356m.g I 0.731