Cla009252 (Citrullus lanatus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cla009252 T021995_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.876 0.876
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.876 0.876
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla009252 B3 83 184

Links

Other B3 family TFs
Other Citrullus lanatus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30131.m006860 Ricinus communis 30131.m006860 I 0.838
Bo00285s530 Brassica oleracea Bo00285s530 I 0.857
Bo7g083910 Brassica oleracea Bo7g083910 I 0.747
Bostr.0556s0351 Boechera stricta Bostr.0556s0351 I 0.867
Bra032953 Brassica rapa Bra032953 I 0.857
Cagra.1841s0002 Capsella grandiflora Cagra.1841s0002 I 0.838
Carubv10019353m.g Capsella rubella Carubv10019353m.g I 0.838
cassava11393.m1 Manihot esculenta cassava11393.m1 I 0.814
cassava14836.m1 Manihot esculenta cassava14836.m1 I 0.783
Ca_05976 Cicer arietinum Ca_05976 I 0.866
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I 0.887
evm.TU.supercontig_70.84 Carica papaya evm.TU.supercontig_70.84 I 0.800
FUS3 Vitis vinifera VIT_14s0068g01290 I 0.758
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I 0.866
FUS3 Arabidopsis thaliana AT3G26790 D 0.867
GLYMA16G05480 Glycine max GLYMA16G05480 I 0.857
GLYMA19G27336 Glycine max GLYMA19G27336 I 0.867
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I 0.857
LjSGA_037319.1 Lotus japonicus LjSGA_037319.1 I 0.897
Lus10012572.g Linum usitatissimum Lus10012572.g I 0.827
Lus10041521.g Linum usitatissimum Lus10041521.g I 0.827
MDP0000268649 Malus domestica MDP0000268649 I 0.851
MTR_7g083700 Medicago truncatula MTR_7g083700 I 0.845
orange1.1g041864m.g Citrus sinensis orange1.1g041864m.g I 0.859
Pm016099 Prunus mume Pm016099 I 0.897
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I 0.844
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I 0.867
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I 0.867
TCM_017321 Theobroma cacao TCM_017321 I 0.876
Thhalv10005481m.g Eutrema salsugineum Thhalv10005481m.g I 0.867