Lus10012572.g (Linum usitatissimum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Lus10012572.g T023470_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.837 0.837
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10012572 B3 120 222

Links

Other B3 family TFs
Other Linum usitatissimum TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30131.m006860 Ricinus communis 30131.m006860 I 0.828
Bo00285s530 Brassica oleracea Bo00285s530 I 0.827
Bostr.0556s0351 Boechera stricta Bostr.0556s0351 I 0.837
Bra032953 Brassica rapa Bra032953 I 0.827
Cagra.1841s0002 Capsella grandiflora Cagra.1841s0002 I 0.808
Carubv10019353m.g Capsella rubella Carubv10019353m.g I 0.808
cassava11393.m1 Manihot esculenta cassava11393.m1 I 0.773
cassava14836.m1 Manihot esculenta cassava14836.m1 I 0.728
Ca_05976 Cicer arietinum Ca_05976 I 0.786
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I 0.827
Cla009252 Citrullus lanatus Cla009252 I 0.827
evm.TU.supercontig_70.84 Carica papaya evm.TU.supercontig_70.84 I 0.812
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I 0.827
FUS3 Arabidopsis thaliana AT3G26790 D 0.837
FUS3 Vitis vinifera VIT_14s0068g01290 I 0.778
GLYMA16G05480 Glycine max GLYMA16G05480 I 0.765
GLYMA19G27336 Glycine max GLYMA19G27336 I 0.765
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I 0.816
LjSGA_037319.1 Lotus japonicus LjSGA_037319.1 I 0.794
Lus10041521.g Linum usitatissimum Lus10041521.g I 0.959
MDP0000268649 Malus domestica MDP0000268649 I 0.791
MTR_7g083700 Medicago truncatula MTR_7g083700 I 0.794
orange1.1g041864m.g Citrus sinensis orange1.1g041864m.g I 0.818
Pm016099 Prunus mume Pm016099 I 0.847
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I 0.786
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I 0.806
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I 0.837
TCM_017321 Theobroma cacao TCM_017321 I 0.837
Thhalv10005481m.g Eutrema salsugineum Thhalv10005481m.g I 0.837