XP_002492476.1 (Pichia pastoris)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 XP_002492476.1 T029054_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002492476.1 BED ZF 159 205

Links

Other BED ZF family TFs
Other Pichia pastoris TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ABF1 Arabidopsis thaliana AT1G49720 D
ABF2 Arabidopsis thaliana AT1G45249 D
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I
ABF3 Arabidopsis thaliana AT4G34000 D
ABF4 Arabidopsis thaliana AT3G19290 D
ABI5 Populus trichocarpa POPTR_0006s08300 I
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I
BGIOSGA022536 Oryza indica BGIOSGA022536 I
BGIOSGA028831 Oryza indica BGIOSGA028831 I
BGIOSGA040605 Oryza indica BGIOSGA040605 I
Bo1g114840 Brassica oleracea Bo1g114840 I
Bo6g006970 Brassica oleracea Bo6g006970 I
Bo6g018480 Brassica oleracea Bo6g018480 I
Bo7g116570 Brassica oleracea Bo7g116570 I
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I
Bra011485 Brassica rapa Bra011485 I
Bra018800 Brassica rapa Bra018800 I
Bra040260 Brassica rapa Bra040260 I
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I
Carubv10009177m.g Capsella rubella Carubv10009177m.g I
Carubv10009399m.g Capsella rubella Carubv10009399m.g I
Carubv10013729m.g Capsella rubella Carubv10013729m.g I
cassava11518.m1 Manihot esculenta cassava11518.m1 I
cassava32856.m1 Manihot esculenta cassava32856.m1 I
Ca_00791 Cicer arietinum Ca_00791 I
Ca_06458 Cicer arietinum Ca_06458 I
chr1.CM0010.310.nd Lotus japonicus chr1.CM0010.310.nd I
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I
Cla016272 Citrullus lanatus Cla016272 I
Cla022926 Citrullus lanatus Cla022926 I
Cucsa.219780 Cucumis sativus Cucsa.219780 I
Cucsa.385090 Cucumis sativus Cucsa.385090 I
Cucsa.396070 Cucumis sativus Cucsa.396070 I
DPBF2 Vitis vinifera VIT_06s0080g00340 I
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I
gene30280-v1.0-hybrid Fragaria vesca gene30280-v1.0-hybrid I
GLYMA07G33600 Glycine max GLYMA07G33600 I
GLYMA10G08370 Glycine max GLYMA10G08370 I
GLYMA13G22061 Glycine max GLYMA13G22061 I
GLYMA19G37910 Glycine max GLYMA19G37910 I
Gorai.002G240500 Gossypium raimondii Gorai.002G240500 I
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I
GRMZM2G002075 Zea mays GRMZM2G002075 I
GRMZM2G157722 Zea mays GRMZM2G157722 I
GRMZM2G478417 Zea mays GRMZM2G478417 I
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I
LPERR06G06440 Leersia perrieri LPERR06G06440 I
LPERR08G14740 Leersia perrieri LPERR08G14740 I
Lus10009755.g Linum usitatissimum Lus10009755.g I
Lus10014194.g Linum usitatissimum Lus10014194.g I
Lus10017049.g Linum usitatissimum Lus10017049.g I
Lus10021369.g Linum usitatissimum Lus10021369.g I
Lus10022720.g Linum usitatissimum Lus10022720.g I
Lus10027897.g Linum usitatissimum Lus10027897.g I
MDP0000144105 Malus domestica MDP0000144105 I
MDP0000177486 Malus domestica MDP0000177486 I
MDP0000231542 Malus domestica MDP0000231542 I
MDP0000248567 Malus domestica MDP0000248567 I
MDP0000296303 Malus domestica MDP0000296303 I
MDP0000701734 Malus domestica MDP0000701734 I
mgf002176m Mimulus guttatus mgf002176m I
MLOC_61490 Hordeum vulgare MLOC_61490 I
MLOC_66546 Hordeum vulgare MLOC_66546 I
MTR_4g085910 Medicago truncatula MTR_4g085910 I
MTR_7g104480 Medicago truncatula MTR_7g104480 I
OB06G16510 Oryza brachyantha OB06G16510 I
OB09G19140 Oryza brachyantha OB09G19140 I
OBART01G37980 Oryza barthii OBART01G37980 I
OBART06G07070 Oryza barthii OBART06G07070 I
OBART08G17810 Oryza barthii OBART08G17810 I
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I
OGLUM06G07500 Oryza glumaepatula OGLUM06G07500 I
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I
OLONG_000475 Oryza longistaminata OLONG_000475 I
OMERI06G08210 Oryza meridionalis OMERI06G08210 I
ONIVA04G25730 Oryza nivara ONIVA04G25730 I
ONIVA06G08350 Oryza nivara ONIVA06G08350 I
ONIVA08G19830 Oryza nivara ONIVA08G19830 I
OPUNC05G18710 Oryza punctata OPUNC05G18710 I
OPUNC06G06690 Oryza punctata OPUNC06G06690 I
OPUNC08G15700 Oryza punctata OPUNC08G15700 I
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I
ORGLA06G0066000 Oryza glaberrima ORGLA06G0066000 I
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I
OS03G0322700 Oryza sativa OS03G0322700 I
OS08G0471950 Oryza sativa OS08G0471950 D
Pavir.J31353 Panicum virgatum Pavir.J31353 I
PGSC0003DMG400002660 Solanum tuberosum PGSC0003DMG400002660 I
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I
Pm005288 Prunus mume Pm005288 I
Pm026185 Prunus mume Pm026185 I
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I
PRUPE_ppa019833mg Prunus persica PRUPE_ppa019833mg I
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I
Sb06g026410 Sorghum bicolor Sb06g026410 I
Sb07g022965 Sorghum bicolor Sb07g022965 I
Sb08g003760 Sorghum bicolor Sb08g003760 I
Sb10g007090 Sorghum bicolor Sb10g007090 I
SELMODRAFT_177659 Selaginella moellendorffii SELMODRAFT_177659 I
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I
Si013904m.g Setaria italica Si013904m.g I
Si030114m.g Setaria italica Si030114m.g I
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I
TCM_007074 Theobroma cacao TCM_007074 I
TCM_022574 Theobroma cacao TCM_022574 I
TCM_033824 Theobroma cacao TCM_033824 I
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I
Traes_4AS_F9C171219 Triticum aestivum Traes_4AS_F9C171219 I
Traes_4BL_4C9A415F3 Triticum aestivum Traes_4BL_4C9A415F3 I
Traes_4DL_F38ED7FB6 Triticum aestivum Traes_4DL_F38ED7FB6 I
TRIUR3_15490 Triticum urartu TRIUR3_15490 I
TRIUR3_26781 Triticum urartu TRIUR3_26781 I
TRIUR3_29638 Triticum urartu TRIUR3_29638 I