ARNTL (Oryctolagus cuniculus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSOCUG00000005940 T036021_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.914 1.000
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.914 1.000
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.914 1.000
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.914 1.000
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.914 1.000
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.914 1.000
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.914 1.000
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.914 1.000
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000005145 bHLH 73 126
ENSOCUP00000017774 bHLH 80 133

Links

Other bHLH family TFs
Other Oryctolagus cuniculus TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R001981 Aptenodytes forsteri Afo_R001981 I
Alligator_sinensis_CCG003696.1 Alligator sinensis Alligator_sinensis_CCG003696.1 I
Alligator_sinensis_CCG004564.1 Alligator sinensis Alligator_sinensis_CCG004564.1 I
Alligator_sinensis_CCG015719.1 Alligator sinensis Alligator_sinensis_CCG015719.1 I
Cmyd_10002838 Chelonia mydas Cmyd_10002838 I
Cmyd_10010684 Chelonia mydas Cmyd_10010684 I
ENSAMEG00000017984 Ailuropoda melanoleuca ENSAMEG00000017984 I
ENSAMXG00000004616 Astyanax mexicanus ENSAMXG00000004616 I
ENSAPLG00000009319 Anas platyrhynchos ENSAPLG00000009319 I
ENSCSAG00000015263 Chlorocebus sabaeus ENSCSAG00000015263 I
ENSGMOG00000007264 Gadus morhua ENSGMOG00000007264 I
ENSGMOG00000007988 Gadus morhua ENSGMOG00000007988 I
ENSLACG00000005750 Latimeria chalumnae ENSLACG00000005750 I
ENSLACG00000018600 Latimeria chalumnae ENSLACG00000018600 I
ENSLOCG00000011297 Lepisosteus oculatus ENSLOCG00000011297 I
ENSLOCG00000015563 Lepisosteus oculatus ENSLOCG00000015563 I
ENSMEUG00000002435 Macropus eugenii ENSMEUG00000002435 I
ENSMEUG00000014941 Macropus eugenii ENSMEUG00000014941 I
ENSMPUG00000003106 Mustela putorius furo ENSMPUG00000003106 I
ENSNLEG00000001962 Nomascus leucogenys ENSNLEG00000001962 I
ENSOARG00000012720 Ovis aries ENSOARG00000012720 I
ENSOARG00000020948 Ovis aries ENSOARG00000020948 I
ENSONIG00000007600 Oreochromis niloticus ENSONIG00000007600 I
ENSONIG00000018961 Oreochromis niloticus ENSONIG00000018961 I
ENSP00000349770-D2 Bos grunniens ENSP00000349770-D2 I
ENSPANG00000011328 Papio anubis ENSPANG00000011328 I
ENSPFOG00000005876 Poecilia formosa ENSPFOG00000005876 I
ENSPFOG00000013528 Poecilia formosa ENSPFOG00000013528 I
ENSPFOG00000014077 Poecilia formosa ENSPFOG00000014077 I
ENSPPYG00000000253 Pongo abelii ENSPPYG00000000253 I
ENSPSIG00000003597 Pelodiscus sinensis ENSPSIG00000003597 I
ENSSHAG00000006683 Sarcophilus harrisii ENSSHAG00000006683 I
ENSSTOG00000028204 Ictidomys tridecemlineatus ENSSTOG00000028204 I
ENSTSYG00000010982 Tarsius syrichta ENSTSYG00000010982 I
ENSXMAG00000007143 Xiphophorus maculatus ENSXMAG00000007143 I
ENSXMAG00000013056 Xiphophorus maculatus ENSXMAG00000013056 I
irf5 Takifugu rubripes ENSTRUG00000000641 I
IRF5 Monodelphis domestica ENSMODG00000014710 I
irf5 Danio rerio ENSDARG00000045681 I
IRF5 Homo sapiens ENSG00000128604 D
irf5 Gasterosteus aculeatus ENSGACG00000000695 I
irf5 Tetraodon nigroviridis ENSTNIG00000003346 I
irf5 Xenopus tropicalis XB-GENE-998624 I
irf5.L Xenopus laevis XB-GENE-998629 D
Irf6 Dipodomys ordii ENSDORG00000008891 I
irf6 Gasterosteus aculeatus ENSGACG00000000990 I
irf6 Tetraodon nigroviridis ENSTNIG00000014635 I
IRF6 Homo sapiens ENSG00000117595 D
IRF6 Oryctolagus cuniculus ENSOCUG00000004035 I
IRF6 Felis catus ENSFCAG00000015138 I
IRF6 Tursiops truncatus ENSTTRG00000001121 I
IRF6 Vicugna pacos ENSVPAG00000010247 I
IRF6 Echinops telfairi ENSETEG00000008368 I
IRF6 Equus caballus ENSECAG00000007482 I
irf6 Takifugu rubripes ENSTRUG00000006951 I
IRF6 Dasypus novemcinctus ENSDNOG00000001694 I
irf6 Danio rerio ENSDARG00000101986 I
IRF6 Cavia porcellus ENSCPOG00000023829 I
IRF6 Callithrix jacchus ENSCJAG00000015032 I
IRF6 Choloepus hoffmanni ENSCHOG00000010399 I
IRF6 Canis familiaris ENSCAFG00000011971 I
irf6 Xenopus tropicalis XB-GENE-876410 I
IRF6 Bos taurus ENSBTAG00000002849 I
IRF6 Anolis carolinensis ENSACAG00000005931 I
IRF6 Monodelphis domestica ENSMODG00000002539 I
IRF6 Otolemur garnettii ENSOGAG00000010708 I
IRF6 Ornithorhynchus anatinus ENSOANG00000013718 I
Irf6 Mus musculus ENSMUSG00000026638 D
IRF6 Ochotona princeps ENSOPRG00000014295 I
irf6 Oryzias latipes ENSORLG00000000511 I
IRF6 Taeniopygia guttata ENSTGUG00000001485 I
IRF6 Procavia capensis ENSPCAG00000006456 I
IRF6 Macaca mulatta ENSMMUG00000022065 I
IRF6 Myotis lucifugus ENSMLUG00000004509 I
IRF6 Microcebus murinus ENSMICG00000001233 I
IRF6 Meleagris gallopavo ENSMGAG00000004431 D
IRF6 Loxodonta africana ENSLAFG00000001374 I
IRF6 Pan troglodytes ENSPTRG00000001941 I
IRF6 Pteropus vampyrus ENSPVAG00000004865 I
Irf6 Rattus norvegicus ENSRNOG00000005082 I
IRF6 Gorilla gorilla ENSGGOG00000006214 I
IRF6 Sus scrofa ENSSSCG00000015612 I
IRF6 Gallus gallus ENSGALG00000001405 D
irf6.2 Xenopus tropicalis XB-GENE-5910331 D
irf6.2.L Xenopus laevis XB-GENE-5910427 I
irf6.S Xenopus laevis XB-GENE-876421 I
Myotis_brandtii_IRF6_10012270 Myotis brandtii Myotis_brandtii_IRF6_10012270 I
Ogr12956 Ophisaurus gracilis Ogr12956 I
Pvit_14327 Pogona vitticeps Pvit_14327 I
Pvit_15428 Pogona vitticeps Pvit_15428 I