orange1.1g039972m.g (Citrus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 orange1.1g039972m.g T050611_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g039972m bHLH 35 80

Links

Other bHLH family TFs
Other Citrus sinensis TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30136.m001043 Ricinus communis 30136.m001043 N 0.855
Aan_R000747 Calypte anna Aan_R000747 I
Afo_R010378 Aptenodytes forsteri Afo_R010378 I
Alligator_sinensis_CCG015253.1 Alligator sinensis Alligator_sinensis_CCG015253.1 I
Alligator_sinensis_CCG019028.1 Alligator sinensis Alligator_sinensis_CCG019028.1 I
AMTR_s00036p00178030 Amborella trichopoda AMTR_s00036p00178030 N 0.843
Aquca_010_00306 Aquilegia coerulea Aquca_010_00306 N 0.855
Aquca_022_00317 Aquilegia coerulea Aquca_022_00317 N 0.855
BGIOSGA001389 Oryza indica BGIOSGA001389 N 0.847
BGLB003718 Biomphalaria glabrata BGLB003718 I
Bo3g054830 Brassica oleracea Bo3g054830 N 0.855
Bostr.14547s0021 Boechera stricta Bostr.14547s0021 N 0.855
Bra000979 Brassica rapa Bra000979 N 0.855
BRADI2G41390 Brachypodium distachyon BRADI2G41390 N 0.847
BRADI2G47810 Brachypodium distachyon BRADI2G47810 N 0.842
Brh_R004046 Buceros rhinoceros Brh_R004046 I
Brh_R008908 Buceros rhinoceros Brh_R008908 I
CABZ01066696.1 Danio rerio ENSDARG00000091603 I
Cagra.1261s0004 Capsella grandiflora Cagra.1261s0004 N 0.855
CapteG49381 Capitella teleta CapteG49381 I
Carubv10003163m.g Capsella rubella Carubv10003163m.g N 0.855
cassava15224.m1 Manihot esculenta cassava15224.m1 N 0.855
cassava5871.m1 Manihot esculenta cassava5871.m1 N 0.855
Ca_02154 Cicer arietinum Ca_02154 N 0.855
Ca_09667 Cicer arietinum Ca_09667 N 0.855
chr3.CM1570.150.nc Lotus japonicus chr3.CM1570.150.nc N 0.843
Cla008578 Citrullus lanatus Cla008578 N 0.855
Cla015855 Citrullus lanatus Cla015855 N 0.847
Cla020499 Citrullus lanatus Cla020499 N 0.843
Cmyd_10006869 Chelonia mydas Cmyd_10006869 I
Cmyd_10010656 Chelonia mydas Cmyd_10010656 I
Cucsa.101020 Cucumis sativus Cucsa.101020 N 0.855
Cucsa.360770 Cucumis sativus Cucsa.360770 N 0.847
Cucsa.366890 Cucumis sativus Cucsa.366890 N 0.843
ENSACAG00000005980 Anolis carolinensis ENSACAG00000005980 I
ENSACAG00000017046 Anolis carolinensis ENSACAG00000017046 I
ENSAMEG00000000014 Ailuropoda melanoleuca ENSAMEG00000000014 I
ENSAMEG00000012594 Ailuropoda melanoleuca ENSAMEG00000012594 I
ENSAMXG00000011388 Astyanax mexicanus ENSAMXG00000011388 I
ENSAMXG00000017924 Astyanax mexicanus ENSAMXG00000017924 I
ENSAMXG00000025213 Astyanax mexicanus ENSAMXG00000025213 I
ENSAPLG00000000896 Anas platyrhynchos ENSAPLG00000000896 I
ENSBTAP00000025739-D1 Bos grunniens ENSBTAP00000025739-D1 I
ENSCPOG00000003558 Cavia porcellus ENSCPOG00000003558 I
ENSCPOG00000008197 Cavia porcellus ENSCPOG00000008197 I
ENSCPOG00000024157 Cavia porcellus ENSCPOG00000024157 I
ENSCSAG00000000466 Chlorocebus sabaeus ENSCSAG00000000466 I
ENSCSAG00000001247 Chlorocebus sabaeus ENSCSAG00000001247 I
ENSCSAG00000006504 Chlorocebus sabaeus ENSCSAG00000006504 I
ENSDNOG00000043562 Dasypus novemcinctus ENSDNOG00000043562 I
ENSDORG00000004570 Dipodomys ordii ENSDORG00000004570 I
ENSECAG00000018746 Equus caballus ENSECAG00000018746 I
ENSETEG00000008816 Echinops telfairi ENSETEG00000008816 I
ENSFALG00000009303 Ficedula albicollis ENSFALG00000009303 I
ENSFALG00000015243 Ficedula albicollis ENSFALG00000015243 I
ENSFCAG00000031106 Felis catus ENSFCAG00000031106 I
ENSGMOG00000005856 Gadus morhua ENSGMOG00000005856 I
ENSGMOG00000012044 Gadus morhua ENSGMOG00000012044 I
ENSGMOG00000019785 Gadus morhua ENSGMOG00000019785 I
ENSLACG00000011366 Latimeria chalumnae ENSLACG00000011366 I
ENSLACG00000017036 Latimeria chalumnae ENSLACG00000017036 I
ENSLOCG00000007669 Lepisosteus oculatus ENSLOCG00000007669 I
ENSLOCG00000009966 Lepisosteus oculatus ENSLOCG00000009966 I
ENSLOCG00000017967 Lepisosteus oculatus ENSLOCG00000017967 I
ENSMEUG00000008559 Macropus eugenii ENSMEUG00000008559 I
ENSMEUG00000011615 Macropus eugenii ENSMEUG00000011615 I
ENSMGAG00000010823 Meleagris gallopavo ENSMGAG00000010823 I
ENSMICG00000001720 Microcebus murinus ENSMICG00000001720 I
ENSMLUG00000006388 Myotis lucifugus ENSMLUG00000006388 I
ENSMMUG00000017870 Macaca mulatta ENSMMUG00000017870 I
ENSMPUG00000004316 Mustela putorius furo ENSMPUG00000004316 I
ENSMPUG00000012410 Mustela putorius furo ENSMPUG00000012410 I
ENSNLEG00000013010 Nomascus leucogenys ENSNLEG00000013010 I
ENSNLEG00000016398 Nomascus leucogenys ENSNLEG00000016398 I
ENSNLEG00000018969 Nomascus leucogenys ENSNLEG00000018969 I
ENSOANG00000032005 Ornithorhynchus anatinus ENSOANG00000032005 I
ENSOARG00000003039 Ovis aries ENSOARG00000003039 I
ENSOARG00000003450 Ovis aries ENSOARG00000003450 I
ENSOARG00000009454 Ovis aries ENSOARG00000009454 I
ENSOGAG00000016551 Otolemur garnettii ENSOGAG00000016551 I
ENSONIG00000009960 Oreochromis niloticus ENSONIG00000009960 I
ENSONIG00000018071 Oreochromis niloticus ENSONIG00000018071 I
ENSONIG00000021296 Oreochromis niloticus ENSONIG00000021296 I
ENSORLG00000013953 Oryzias latipes ENSORLG00000013953 I
ENSP00000334547 Macaca fascicularis ENSP00000334547 I
ENSP00000334547-D1 Bos grunniens ENSP00000334547-D1 I
ENSP00000360950 Macaca fascicularis ENSP00000360950 I
ENSP00000360950-D1 Bos grunniens ENSP00000360950-D1 I
ENSPANG00000009893 Papio anubis ENSPANG00000009893 I
ENSPANG00000014670 Papio anubis ENSPANG00000014670 I
ENSPANG00000017357 Papio anubis ENSPANG00000017357 I
ENSPFOG00000005195 Poecilia formosa ENSPFOG00000005195 I
ENSPFOG00000013394 Poecilia formosa ENSPFOG00000013394 I
ENSPFOG00000020678 Poecilia formosa ENSPFOG00000020678 I
ENSPMAG00000002259 Petromyzon marinus ENSPMAG00000002259 I
ENSPPYG00000009621 Pongo abelii ENSPPYG00000009621 I
ENSPSIG00000000318 Pelodiscus sinensis ENSPSIG00000000318 I
ENSPSIG00000010614 Pelodiscus sinensis ENSPSIG00000010614 I
ENSPVAG00000005351 Pteropus vampyrus ENSPVAG00000005351 I
ENSSHAG00000010681 Sarcophilus harrisii ENSSHAG00000010681 I
ENSSHAG00000014421 Sarcophilus harrisii ENSSHAG00000014421 I
ENSSHAG00000015614 Sarcophilus harrisii ENSSHAG00000015614 I
ENSSSCG00000013743 Sus scrofa ENSSSCG00000013743 I
ENSSSCG00000026460 Sus scrofa ENSSSCG00000026460 I
ENSSTOG00000008396 Ictidomys tridecemlineatus ENSSTOG00000008396 I
ENSSTOG00000026950 Ictidomys tridecemlineatus ENSSTOG00000026950 I
ENSSTOG00000028401 Ictidomys tridecemlineatus ENSSTOG00000028401 I
ENSTGUG00000006333 Taeniopygia guttata ENSTGUG00000006333 I
ENSTGUG00000018537 Taeniopygia guttata ENSTGUG00000018537 I
ENSTRUG00000004487 Takifugu rubripes ENSTRUG00000004487 I
ENSTSYG00000009754 Tarsius syrichta ENSTSYG00000009754 I
ENSXMAG00000007215 Xiphophorus maculatus ENSXMAG00000007215 I
ENSXMAG00000015686 Xiphophorus maculatus ENSXMAG00000015686 I
ENSXMAG00000020363 Xiphophorus maculatus ENSXMAG00000020363 I
estExt_fgenesh1_pg.C_1630065 Physcomitrella patens estExt_fgenesh1_pg.C_1630065 N 0.854
estExt_fgenesh1_pg.C_480124 Physcomitrella patens estExt_fgenesh1_pg.C_480124 N 0.854
estExt_fgenesh1_pg.C_980121 Physcomitrella patens estExt_fgenesh1_pg.C_980121 N 0.854
Eucgr.H04946 Eucalyptus grandis Eucgr.H04946 N 0.855
gene17881-v1.0-hybrid Fragaria vesca gene17881-v1.0-hybrid N 0.855
Gfo_R006237 Geospiza fortis Gfo_R006237 I
Gfo_R009231 Geospiza fortis Gfo_R009231 I
GLYMA04G39210 Glycine max GLYMA04G39210 N 0.855
GLYMA05G32410 Glycine max GLYMA05G32410 N 0.855
GLYMA06G15730 Glycine max GLYMA06G15730 N 0.855
GLYMA08G16570 Glycine max GLYMA08G16570 N 0.855
Gorai.011G116100 Gossypium raimondii Gorai.011G116100 N 0.855
GRMZM2G111666 Zea mays GRMZM2G111666 N 0.846
GSMUA_Achr7G23410_001 Musa acuminata GSMUA_Achr7G23410_001 N 0.843
GSMUA_Achr8G24970_001 Musa acuminata GSMUA_Achr8G24970_001 N 0.843
gw.349.31.1 Branchiostoma floridae gw.349.31.1 I
HEC3 Vitis vinifera VIT_04s0044g01040 N 0.855
HelroG81338 Helobdella robusta HelroG81338 I
IND Arabidopsis thaliana AT4G00120 N 0.855
IND1 Arabidopsis lyrata fgenesh2_kg.6__3690__AT4G00120.1 N 0.855
ISCW010324 Ixodes scapularis ISCW010324 I
LCUP012404 Lucilia cuprina LCUP012404 N
LjSGA_011209.1 Lotus japonicus LjSGA_011209.1 N 0.855
LjSGA_012662.1 Lotus japonicus LjSGA_012662.1 N 0.856
LjT10C23.20.nc Lotus japonicus LjT10C23.20.nc N 0.855
LPERR01G17090 Leersia perrieri LPERR01G17090 N 0.847
Lus10005710.g Linum usitatissimum Lus10005710.g N 0.855
Lus10033488.g Linum usitatissimum Lus10033488.g N 0.843
Lus10042647.g Linum usitatissimum Lus10042647.g N 0.855
LYL1 Bos taurus ENSBTAG00000019329 I
LYL1 Homo sapiens ENSG00000104903 D
LYL1 Gorilla gorilla ENSGGOG00000023512 I
LYL1 Loxodonta africana ENSLAFG00000005235 I
LYL1 Myotis lucifugus ENSMLUG00000012805 I
LYL1 Macaca mulatta ENSMMUG00000001166 I
LYL1 Monodelphis domestica ENSMODG00000011593 I
Lyl1 Mus musculus ENSMUSG00000034041 D
LYL1 Ornithorhynchus anatinus ENSOANG00000006846 I
LYL1 Otolemur garnettii ENSOGAG00000033339 I
LYL1 Procavia capensis ENSPCAG00000003676 I
LYL1 Pteropus vampyrus ENSPVAG00000015075 I
Lyl1 Rattus norvegicus ENSRNOG00000002950 I
LYL1 Tursiops truncatus ENSTTRG00000006376 I
lyl1 Xenopus tropicalis XB-GENE-940268 I
MDOA013066 Musca domestica MDOA013066 N
MDP0000178778 Malus domestica MDP0000178778 N 0.843
MDP0000420192 Malus domestica MDP0000420192 N 0.855
MDP0000436338 Malus domestica MDP0000436338 N 0.843
MDP0000711774 Malus domestica MDP0000711774 N 0.855
mgf019142m Mimulus guttatus mgf019142m N 0.855
MTR_3g101810 Medicago truncatula MTR_3g101810 N 0.855
MTR_7g069590 Medicago truncatula MTR_7g069590 N 0.841
MTR_8g093500 Medicago truncatula MTR_8g093500 N 0.855
Myotis_brandtii_LYL1_10009227 Myotis brandtii Myotis_brandtii_LYL1_10009227 I
Myotis_brandtii_TAL1_10003055 Myotis brandtii Myotis_brandtii_TAL1_10003055 I
Myotis_brandtii_TMEM38B_10031594 Myotis brandtii Myotis_brandtii_TMEM38B_10031594 I
OBART01G19850 Oryza barthii OBART01G19850 N 0.847
OGLUM01G23470 Oryza glumaepatula OGLUM01G23470 N 0.847
Ogr06402 Ophisaurus gracilis Ogr06402 I
Ogr13537 Ophisaurus gracilis Ogr13537 I
Ogr15798 Ophisaurus gracilis Ogr15798 I
OMERI01G18460 Oryza meridionalis OMERI01G18460 N 0.847
ONIVA01G07440 Oryza nivara ONIVA01G07440 N 0.847
OPUNC01G20250 Oryza punctata OPUNC01G20250 N 0.847
ORGLA01G0163600 Oryza glaberrima ORGLA01G0163600 N 0.847
OS01G0566800 Oryza sativa OS01G0566800 N 0.847
Pavir.Ea01618 Panicum virgatum Pavir.Ea01618 N 0.847
Pavir.Eb02113 Panicum virgatum Pavir.Eb02113 N 0.847
Pavir.Eb02901 Panicum virgatum Pavir.Eb02901 N 0.846
PGSC0003DMG400004039 Solanum tuberosum PGSC0003DMG400004039 N 0.847
PGSC0003DMG400028657 Solanum tuberosum PGSC0003DMG400028657 N 0.855
Pm001707 Prunus mume Pm001707 N 0.855
Pm026380 Prunus mume Pm026380 N 0.855
POPTR_0001s19250 Populus trichocarpa POPTR_0001s19250 N 0.843
POPTR_0005s06220 Populus trichocarpa POPTR_0005s06220 N 0.855
PRUPE_ppa021410mg Prunus persica PRUPE_ppa021410mg N 0.855
PRUPE_ppa022938mg Prunus persica PRUPE_ppa022938mg N 0.855
Pvit_02813 Pogona vitticeps Pvit_02813 I
Pvit_09175 Pogona vitticeps Pvit_09175 I
Pvit_14582 Pogona vitticeps Pvit_14582 I
Sakowv30007933m.g Saccoglossus kowalevskii Sakowv30007933m.g I
SapurV1A.0001s0420 Salix purpurea SapurV1A.0001s0420 N 0.856
SapurV1A.0352s0020 Salix purpurea SapurV1A.0352s0020 N 0.855
SapurV1A.0550s0030 Salix purpurea SapurV1A.0550s0030 N 0.855
SapurV1A.0623s0130 Salix purpurea SapurV1A.0623s0130 N 0.842
SapurV1A.0905s0090 Salix purpurea SapurV1A.0905s0090 N 0.856
SapurV1A.2172s0010 Salix purpurea SapurV1A.2172s0010 N 0.843
Sb03g025570 Sorghum bicolor Sb03g025570 N 0.847
Sb03g032520 Sorghum bicolor Sb03g032520 N 0.846
SELMODRAFT_405220 Selaginella moellendorffii SELMODRAFT_405220 N 0.855
SELMODRAFT_415047 Selaginella moellendorffii SELMODRAFT_415047 N 0.855
Si001743m.g Setaria italica Si001743m.g N 0.846
Si003753m.g Setaria italica Si003753m.g N 0.847
SMAR000405 Strigamia maritima SMAR000405 I
Solyc02g090950.1 Solanum lycopersicum Solyc02g090950.1 N 0.847
Solyc11g005780.1 Solanum lycopersicum Solyc11g005780.1 N 0.855
Solyc12g088790.1 Solanum lycopersicum Solyc12g088790.1 N 0.855
TAL1 Bos taurus ENSBTAG00000005029 I
TAL1 Canis familiaris ENSCAFG00000004032 I
TAL1 Callithrix jacchus ENSCJAG00000021222 I
tal1 Danio rerio ENSDARG00000019930 I
TAL1 Dasypus novemcinctus ENSDNOG00000047501 I
TAL1 Homo sapiens ENSG00000162367 D
tal1 Gasterosteus aculeatus ENSGACG00000013846 I
tal1 Gasterosteus aculeatus ENSGACG00000019476 I
TAL1 Gallus gallus ENSGALG00000023296 I
TAL1 Gorilla gorilla ENSGGOG00000011776 I
TAL1 Loxodonta africana ENSLAFG00000013880 I
TAL1 Monodelphis domestica ENSMODG00000001502 I
Tal1 Mus musculus ENSMUSG00000028717 D
TAL1 Oryctolagus cuniculus ENSOCUG00000017248 I
TAL1 Ochotona princeps ENSOPRG00000004033 I
tal1 Oryzias latipes ENSORLG00000003776 I
tal1 Oryzias latipes ENSORLG00000016044 I
TAL1 Procavia capensis ENSPCAG00000006179 I
TAL1 Pan troglodytes ENSPTRG00000000710 I
Tal1 Rattus norvegicus ENSRNOG00000025051 I
TAL1 Taeniopygia guttata ENSTGUG00000008542 I
tal1 Tetraodon nigroviridis ENSTNIG00000001525 I
tal1 Tetraodon nigroviridis ENSTNIG00000006133 I
tal1 Takifugu rubripes ENSTRUG00000008218 I
TAL1 Tursiops truncatus ENSTTRG00000011653 I
TAL1 Vicugna pacos ENSVPAG00000004268 I
tal1 Xenopus tropicalis XB-GENE-479827 I
tal1.S Xenopus laevis XB-GENE-865312 I
TAL2 Anolis carolinensis ENSACAG00000004545 I
TAL2 Bos taurus ENSBTAG00000045852 I
TAL2 Canis familiaris ENSCAFG00000032112 I
TAL2 Callithrix jacchus ENSCJAG00000022534 I
tal2 Danio rerio ENSDARG00000042041 I
TAL2 Dasypus novemcinctus ENSDNOG00000006670 I
Tal2 Dipodomys ordii ENSDORG00000012882 I
TAL2 Equus caballus ENSECAG00000004995 I
TAL2 Erinaceus europaeus ENSEEUG00000003187 I
TAL2 Echinops telfairi ENSETEG00000007386 I
TAL2 Felis catus ENSFCAG00000008052 I
TAL2 Homo sapiens ENSG00000186051 I
tal2 Gasterosteus aculeatus ENSGACG00000013904 I
TAL2 Gallus gallus ENSGALG00000023114 I
TAL2 Gorilla gorilla ENSGGOG00000006780 I
TAL2 Loxodonta africana ENSLAFG00000008309 I
TAL2 Myotis lucifugus ENSMLUG00000008792 I
TAL2 Macaca mulatta ENSMMUG00000002671 I
TAL2 Monodelphis domestica ENSMODG00000022957 I
Tal2 Mus musculus ENSMUSG00000028417 I
TAL2 Ornithorhynchus anatinus ENSOANG00000004194 I
TAL2 Otolemur garnettii ENSOGAG00000009225 I
TAL2 Ochotona princeps ENSOPRG00000013838 I
tal2 Oryzias latipes ENSORLG00000000466 I
TAL2 Procavia capensis ENSPCAG00000004449 I
TAL2 Pan troglodytes ENSPTRG00000021225 I
TAL2 Pteropus vampyrus ENSPVAG00000005744 I
Tal2 Rattus norvegicus ENSRNOG00000028082 I
tal2 Takifugu rubripes ENSTRUG00000016731 I
TAL2 Tursiops truncatus ENSTTRG00000003494 I
tal2 Xenopus tropicalis XB-GENE-965184 I
Tal_R009538 Tyto alba Tal_R009538 I
TCM_001435 Theobroma cacao TCM_001435 N 0.855
Thhalv10012562m.g Eutrema salsugineum Thhalv10012562m.g N 0.856
Thhalv10029526m.g Eutrema salsugineum Thhalv10029526m.g N 0.855
TRAES3BF276900020CFD_g Triticum aestivum TRAES3BF276900020CFD_g N 0.847
TRIUR3_28638 Triticum urartu TRIUR3_28638 N 0.847
VIT_18s0001g10400 Vitis vinifera VIT_18s0001g10400 N 0.855
XM_002310473.1 Populus trichocarpa POPTR_0007s03950 N 0.855