SMUV_0000995901 (Syphacia muris)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SMUV_0000995901 T054951_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hlh-1
M00746_2.00 		Caenorhabditis elegans
RACAGCTGNN
NNCAGCTGTY		 PBM
DeMasi et al.(2011)
HLH-1 		0.884 0.923
hlh-1
M00929_2.00 		Caenorhabditis elegans
GACAGCTG
CAGCTGTC		 PBM
Grove et al.(2009)
HLH1 		0.884 0.923
hlh-1
M08063_2.00 		Caenorhabditis elegans
VAACAGYTGNY
RNCARCTGTTB		 ChIP-seq
Mathelier et al.(2014)
MA0545.1 		0.884 0.923
hlh-1
M09481_2.00 		Caenorhabditis elegans
NNRNCARNTGNY
RNCANYTGNYNN		 Misc
Heinz et al.(2010)
cElegans-Embryo-HLH1_modEncode 		0.884 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000995901-mRNA-1 bHLH 154 205

Links

Other bHLH family TFs
Other Syphacia muris TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000253201 Angiostrongylus costaricensis ACOC_0000253201 I 0.884
ALUE_0000745301 Ascaris lumbricoides ALUE_0000745301 I 0.884
ANCCEY_00328 Ancylostoma ceylanicum ANCCEY_00328 I 0.884
ASIM_0001156501 Anisakis simplex ASIM_0001156501 I 0.884
ASU_01867 Ascaris suum ASU_01867 I 0.884
A_07871 Schistosoma haematobium A_07871 I 0.842
Bm1750 Brugia malayi Bm1750 I 0.884
BXY_0489100 Bursaphelenchus xylophilus BXY_0489100 I 0.863
CBG13470 Caenorhabditis briggsae CBG13470 I 0.884
CBN11281 Caenorhabditis brenneri CBN11281 I 0.884
CJA13327 Caenorhabditis japonica CJA13327 I 0.884
CLEC002330 Cimex lectularius CLEC002330 I 0.855
CRE17301 Caenorhabditis remanei CRE17301 I 0.884
csin100742 Clonorchis sinensis csin100742 I 0.842
D915_09890 Fasciola hepatica D915_09890 I 0.842
D917_06339 Trichinella nativa D917_06339 I 0.855
D918_04086 Trichuris suis D918_04086 I 0.855
DICVIV_08170 Dictyocaulus viviparus DICVIV_08170 I 0.884
ECPE_0001678601 Echinostoma caproni ECPE_0001678601 I 0.842
EEL_0000993601 Elaeophora elaphi EEL_0000993601 I 0.884
EFV52759 Trichinella spiralis EFV52759 I 0.855
EVEC_0000720901 Enterobius vermicularis EVEC_0000720901 I 0.914
HCOI02168200 Haemonchus contortus HCOI02168200 I 0.884
hlh-1 Caenorhabditis elegans WBGene00001948 D 0.884
LDEC009949 Leptinotarsa decemlineata LDEC009949 I 0.846
LOAG_16988 Loa loa LOAG_16988 I 0.884
nAv.1.0.1.g02052 Acanthocheilonema viteae nAv.1.0.1.g02052 I 0.884
nDi.2.2.2.g00288 Dirofilaria immitis nDi.2.2.2.g00288 I 0.884
NECAME_14163 Necator americanus NECAME_14163 I 0.884
nLs.2.1.2.g06915 Litomosoides sigmodontis nLs.2.1.2.g06915 I 0.884
nOo.2.0.1.g00910 Onchocerca ochengi nOo.2.0.1.g00910 I 0.884
nRc.2.0.1.g24248 Romanomermis culicivorax nRc.2.0.1.g24248 I 0.855
OFLC_0000064301 Onchocerca flexuosa OFLC_0000064301 I 0.884
Ppa-hlh-1 Pristionchus pacificus PPA08246 I 0.863
RPRC009735 Rhodnius prolixus RPRC009735 I 0.855
SBAD_0001285401 Soboliphyme baturini SBAD_0001285401 I 0.855
scaffold6-EXSNAP2012.144 Pristionchus exspectatus scaffold6-EXSNAP2012.144 I 0.863
Smp_167400 Schistosoma mansoni Smp_167400 I 0.842
SPU_021119 Strongylocentrotus purpuratus SPU_021119 I 0.855
T265_10140 Opisthorchis viverrini T265_10140 I 0.842
TC015855 Tribolium castaneum TC015855 I 0.846
TCLT_0000019401 Thelazia callipaeda TCLT_0000019401 I 0.884
TELCIR_07640 Teladorsagia circumcincta TELCIR_07640 I 0.884
TELCIR_14945 Teladorsagia circumcincta TELCIR_14945 I 0.884
TMUE_s0045001800 Trichuris muris TMUE_s0045001800 I 0.855
TRE_0000306101 Trichobilharzia regenti TRE_0000306101 I 0.842
TTRE_0000002701 Trichuris trichiura TTRE_0000002701 I 0.855
WBGene00247572 Onchocerca volvulus WBGene00247572 I 0.884
WUBG_05117 Wuchereria bancrofti WUBG_05117 I 0.884
YQE_11476 Dendroctonus ponderosae YQE_11476 I 0.846