scaffold6-EXSNAP2012.144 (Pristionchus exspectatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 scaffold6-EXSNAP2012.144 T054851_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hlh-1
M00746_2.00 		Caenorhabditis elegans
RACAGCTGNN
NNCAGCTGTY		 PBM
DeMasi et al.(2011)
HLH-1 		0.863 0.885
hlh-1
M00929_2.00 		Caenorhabditis elegans
GACAGCTG
CAGCTGTC		 PBM
Grove et al.(2009)
HLH1 		0.863 0.885
hlh-1
M08063_2.00 		Caenorhabditis elegans
VAACAGYTGNY
RNCARCTGTTB		 ChIP-seq
Mathelier et al.(2014)
MA0545.1 		0.863 0.885
hlh-1
M09481_2.00 		Caenorhabditis elegans
NNRNCARNTGNY
RNCANYTGNYNN		 Misc
Heinz et al.(2010)
cElegans-Embryo-HLH1_modEncode 		0.863 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold6-EXSNAP2012.144 bHLH 166 217

Links

Other bHLH family TFs
Other Pristionchus exspectatus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ppa-hlh-1 Pristionchus pacificus PPA08246 I 0.914
WUBG_05117 Wuchereria bancrofti WUBG_05117 I 0.863
Bm1750 Brugia malayi Bm1750 I 0.863
CBG13470 Caenorhabditis briggsae CBG13470 I 0.863
CBN11281 Caenorhabditis brenneri CBN11281 I 0.863
CJA13327 Caenorhabditis japonica CJA13327 I 0.863
CRE17301 Caenorhabditis remanei CRE17301 I 0.863
LOAG_16988 Loa loa LOAG_16988 I 0.863
hlh-1 Caenorhabditis elegans WBGene00001948 D 0.863
WBGene00247572 Onchocerca volvulus WBGene00247572 I 0.863
ACOC_0000253201 Angiostrongylus costaricensis ACOC_0000253201 I 0.863
ALUE_0000745301 Ascaris lumbricoides ALUE_0000745301 I 0.863
ANCCEY_00328 Ancylostoma ceylanicum ANCCEY_00328 I 0.863
ASIM_0001156501 Anisakis simplex ASIM_0001156501 I 0.863
ASU_01867 Ascaris suum ASU_01867 I 0.863
BXY_0489100 Bursaphelenchus xylophilus BXY_0489100 I 0.863
DICVIV_08170 Dictyocaulus viviparus DICVIV_08170 I 0.863
EEL_0000993601 Elaeophora elaphi EEL_0000993601 I 0.863
EVEC_0000720901 Enterobius vermicularis EVEC_0000720901 I 0.863
HCOI02168200 Haemonchus contortus HCOI02168200 I 0.863
nAv.1.0.1.g02052 Acanthocheilonema viteae nAv.1.0.1.g02052 I 0.863
nDi.2.2.2.g00288 Dirofilaria immitis nDi.2.2.2.g00288 I 0.863
NECAME_14163 Necator americanus NECAME_14163 I 0.863
nLs.2.1.2.g06915 Litomosoides sigmodontis nLs.2.1.2.g06915 I 0.863
nOo.2.0.1.g00910 Onchocerca ochengi nOo.2.0.1.g00910 I 0.863
OFLC_0000064301 Onchocerca flexuosa OFLC_0000064301 I 0.863
SMUV_0000995901 Syphacia muris SMUV_0000995901 I 0.863
TCLT_0000019401 Thelazia callipaeda TCLT_0000019401 I 0.863
TELCIR_07640 Teladorsagia circumcincta TELCIR_07640 I 0.863
TELCIR_14945 Teladorsagia circumcincta TELCIR_14945 I 0.863