atf1 (Danio rerio)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSDARG00000044301 T059419_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF1
M08792_2.00 		Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD		 Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B 		0.848 0.932
ATF1
M09485_2.00 		Homo sapiens
NVTGACGTMA
TKACGTCABN		 Misc
Heinz et al.(2010)
K562-ATF1_GSE31477 		0.848 0.932
ATF1
M09956_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q3 		0.848 0.932
ATF1
M09957_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6_01 		0.848 0.932
ATF1
M09958_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6 		0.848 0.932
Atf1
M00124_2.00 		Mus musculus
NNNNDNDNNN
NNNHNHNNNN		 PBM
Badis et al.(2009)
Atf1_3026 		0.837 0.915
Atf1
M01804_2.00 		Mus musculus
RTGACGTV
BACGTCAY		 PBM
Weirauch et al.(2014)
pTH5005 		0.837 0.915
Atf1
M08820_2.00 		Mus musculus
VTGACGTSAV
BTSACGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B 		0.837 0.915
Creb1
M00992_2.00 		Mus musculus
NNTGACGTCV
BGACGTCANN		 PBM
Mann et al.(2013)
CREB1_UM_HK 		0.835 0.864
Creb1
M01806_2.00 		Mus musculus
VTKACGHNN
NNDCGTMAB		 PBM
Weirauch et al.(2014)
pTH5080 		0.835 0.864
Crem
M01821_2.00 		Mus musculus
NRTKACGTMN
NKACGTMAYN		 PBM
Weirauch et al.(2014)
pTH5002 		0.835 0.864
CREB1
M04264_2.00 		Homo sapiens
NVTKACGTMABN
NVTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX 		0.835 0.864
CREB1
M04258_2.00 		Homo sapiens
NVTKACGTMANN
NNTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1 		0.835 0.864
CREB1
M04259_2.00 		Homo sapiens
NRTGACGTR
YACGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2 		0.835 0.864
CREB1
M04260_2.00 		Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3 		0.835 0.864
CREB1
M04022_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1 		0.835 0.864
CREB1
M04023_2.00 		Homo sapiens
RTGACGTADB
VHTACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2 		0.835 0.864
CREB1
M08066_2.00 		Homo sapiens
NVTGACGTCABN
NVTGACGTCABN		 ChIP-seq
Mathelier et al.(2014)
MA0018.3 		0.835 0.864
CREB1
M08791_2.00 		Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A 		0.835 0.864
Creb1
M08824_2.00 		Mus musculus
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A 		0.835 0.864
Crem
M08845_2.00 		Mus musculus
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C 		0.835 0.864
CREB1
M09948_2.00 		Homo sapiens
TGACGTMW
WKACGTCA		 Transfac
Matys et al.(2006)
V$CREB_01 		0.835 0.864
CREB1
M09949_2.00 		Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV		 Transfac
Matys et al.(2006)
V$CREB_02 		0.835 0.864
CREB1
M09950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q3 		0.835 0.864
CREB1
M09951_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q6 		0.835 0.864
CREB1
M09952_2.00 		Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q2 		0.835 0.864
CREB1
M09953_2.00 		Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q4 		0.835 0.864
CREB1
M09954_2.00 		Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM		 Transfac
Matys et al.(2006)
V$TAXCREB_01 		0.835 0.864
CREB1
M09955_2.00 		Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY		 Transfac
Matys et al.(2006)
V$TAXCREB_02 		0.835 0.864
Creb1
M00991_2.00 		Mus musculus
NNRTGACGYVN
NBRCGTCAYNN		 PBM
Mann et al.(2013)
CREB1_M_HK 		0.835 0.864
CREB1
M04265_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX 		0.835 0.864
CREB1
M04261_2.00 		Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1 		0.835 0.864
CREB1
M04262_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2 		0.835 0.864
CREB1
M04263_2.00 		Homo sapiens
NRTGACGYV
BRCGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3 		0.835 0.864
CrebB-17A
M03659_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_1 		0.810 0.831
CrebB-17A
M03660_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_2 		0.810 0.831
CREM
M04229_2.00 		Homo sapiens
VVTBACGTVABN
NVTBACGTVABB		 SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX 		0.805 0.729
CREM
M08784_2.00 		Homo sapiens
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C 		0.805 0.729
CREM
M09930_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6_01 		0.805 0.729
CREM
M09931_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6 		0.805 0.729
CREM
M04230_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX 		0.805 0.729
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000065037 bZIP 244 302

Links

Other bZIP family TFs
Other Danio rerio TFs

356 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00024p00098860 Amborella trichopoda AMTR_s00024p00098860 I 0.000
AtIDD14 Arabidopsis lyrata fgenesh2_kg.2__1036__AT1G68130.1 I 0.000
AtIDD16 Arabidopsis thaliana AT1G25250 I 0.000
BGIOSGA011151 Oryza indica BGIOSGA011151 I 0.000
BGIOSGA030871 Oryza indica BGIOSGA030871 I 0.000
Bo2g134790 Brassica oleracea Bo2g134790 I 0.000
Bo3g139880 Brassica oleracea Bo3g139880 I 0.000
Bo5g043540 Brassica oleracea Bo5g043540 I 0.000
Bo6g097320 Brassica oleracea Bo6g097320 I 0.000
Bo6g106560 Brassica oleracea Bo6g106560 I 0.000
Bo9g070370 Brassica oleracea Bo9g070370 I 0.000
Bostr.0556s0022 Boechera stricta Bostr.0556s0022 I 0.000
Bostr.15697s0010 Boechera stricta Bostr.15697s0010 I 0.000
Bostr.26959s0085 Boechera stricta Bostr.26959s0085 I 0.000
Bra004050 Brassica rapa Bra004050 I 0.000
Bra004283 Brassica rapa Bra004283 I 0.000
Bra010981 Brassica rapa Bra010981 I 0.000
Bra017432 Brassica rapa Bra017432 I 0.000
Bra024771 Brassica rapa Bra024771 I 0.000
Bra026624 Brassica rapa Bra026624 I 0.000
BRADI1G68730 Brachypodium distachyon BRADI1G68730 I 0.000
BRADI3G37890 Brachypodium distachyon BRADI3G37890 I 0.000
BRADI4G31770 Brachypodium distachyon BRADI4G31770 I 0.000
Cagra.1111s0006 Capsella grandiflora Cagra.1111s0006 I 0.000
Cagra.2231s0014 Capsella grandiflora Cagra.2231s0014 I 0.000
Cagra.3834s0006 Capsella grandiflora Cagra.3834s0006 I 0.000
Carubv10009424m.g Capsella rubella Carubv10009424m.g I 0.000
Carubv10017254m.g Capsella rubella Carubv10017254m.g I 0.000
Carubv10020337m.g Capsella rubella Carubv10020337m.g I 0.000
cassava1947.valid.m1 Manihot esculenta cassava1947.valid.m1 I 0.000
Ca_22171 Cicer arietinum Ca_22171 I 0.000
chr4.CM0387.280.nc Lotus japonicus chr4.CM0387.280.nc I 0.000
Cla005913 Citrullus lanatus Cla005913 I 0.000
Eucgr.G02066 Eucalyptus grandis Eucgr.G02066 I 0.000
Eucgr.H00574 Eucalyptus grandis Eucgr.H00574 I 0.000
Eucgr.K02292 Eucalyptus grandis Eucgr.K02292 I 0.000
F775_43255 Aegilops tauschii F775_43255 I 0.000
gene00618-v1.0-hybrid Fragaria vesca gene00618-v1.0-hybrid I 0.000
GLYMA05G33590 Glycine max GLYMA05G33590 I 0.000
GLYMA07G12170 Glycine max GLYMA07G12170 I 0.000
GLYMA08G06130 Glycine max GLYMA08G06130 I 0.000
GLYMA09G30030 Glycine max GLYMA09G30030 I 0.000
GRMZM2G074032 Zea mays GRMZM2G074032 I 0.000
GRMZM2G110107 Zea mays GRMZM2G110107 I 0.000
GRMZM2G123094 Zea mays GRMZM2G123094 I 0.000
GRMZM2G141031 Zea mays GRMZM2G141031 I 0.000
GRMZM2G465595 Zea mays GRMZM2G465595 I 0.000
GSMUA_Achr5G23130_001 Musa acuminata GSMUA_Achr5G23130_001 I 0.000
GSMUA_Achr6G02490_001 Musa acuminata GSMUA_Achr6G02490_001 I 0.000
GSMUA_Achr7G18610_001 Musa acuminata GSMUA_Achr7G18610_001 I 0.000
IDD14 Arabidopsis thaliana AT1G68130 I 0.000
LPERR03G08760 Leersia perrieri LPERR03G08760 I 0.000
LPERR08G14510 Leersia perrieri LPERR08G14510 I 0.000
LPERR09G08790 Leersia perrieri LPERR09G08790 I 0.000
mgf008235m Mimulus guttatus mgf008235m I 0.000
MLOC_57613 Hordeum vulgare MLOC_57613 I 0.000
OB09G18760 Oryza brachyantha OB09G18760 I 0.000
OBART08G17550 Oryza barthii OBART08G17550 I 0.000
OBART09G12250 Oryza barthii OBART09G12250 I 0.000
OGLUM03G09920 Oryza glumaepatula OGLUM03G09920 I 0.000
OGLUM08G18370 Oryza glumaepatula OGLUM08G18370 I 0.000
OGLUM09G12720 Oryza glumaepatula OGLUM09G12720 I 0.000
OMERI03G09110 Oryza meridionalis OMERI03G09110 I 0.000
OMERI08G14120 Oryza meridionalis OMERI08G14120 I 0.000
OMERI09G13410 Oryza meridionalis OMERI09G13410 I 0.000
ONIVA03G10380 Oryza nivara ONIVA03G10380 I 0.000
ONIVA08G19430 Oryza nivara ONIVA08G19430 I 0.000
ONIVA09G13010 Oryza nivara ONIVA09G13010 I 0.000
OPUNC03G09440 Oryza punctata OPUNC03G09440 I 0.000
OPUNC08G15410 Oryza punctata OPUNC08G15410 I 0.000
OPUNC09G10740 Oryza punctata OPUNC09G10740 I 0.000
ORGLA03G0094200 Oryza glaberrima ORGLA03G0094200 I 0.000
ORGLA08G0153600 Oryza glaberrima ORGLA08G0153600 I 0.000
ORGLA09G0169200 Oryza glaberrima ORGLA09G0169200 I 0.000
ORUFI03G10000 Oryza rufipogon ORUFI03G10000 I 0.000
ORUFI09G13180 Oryza rufipogon ORUFI09G13180 I 0.000
OS03G0237250 Oryza sativa OS03G0237250 I 0.000
OS08G0467100 Oryza sativa OS08G0467100 I 0.000
Pavir.Ba02057 Panicum virgatum Pavir.Ba02057 I 0.000
Pavir.Fa00691 Panicum virgatum Pavir.Fa00691 I 0.000
Pavir.Fb01741 Panicum virgatum Pavir.Fb01741 I 0.000
Pavir.J12350 Panicum virgatum Pavir.J12350 I 0.000
Pavir.J40191 Panicum virgatum Pavir.J40191 I 0.000
PK17145.1 Cannabis sativa PK17145.1 I 0.000
Pm005926 Prunus mume Pm005926 I 0.000
PRUPE_ppa005331mg Prunus persica PRUPE_ppa005331mg I 0.000
SapurV1A.0074s0350 Salix purpurea SapurV1A.0074s0350 I 0.000
Sb02g026230 Sorghum bicolor Sb02g026230 I 0.000
Sb07g022700 Sorghum bicolor Sb07g022700 I 0.000
SGR5 Arabidopsis lyrata fgenesh2_kg.5__108__AT2G01940.1 I 0.000
SGR5 Arabidopsis thaliana AT2G01940 D 0.000
Si029726m.g Setaria italica Si029726m.g I 0.000
Thhalv10004221m.g Eutrema salsugineum Thhalv10004221m.g I 0.000
Thhalv10009376m.g Eutrema salsugineum Thhalv10009376m.g I 0.000
Thhalv10018614m.g Eutrema salsugineum Thhalv10018614m.g I 0.000
Traes_4AS_2718699A7 Triticum aestivum Traes_4AS_2718699A7 I 0.000