CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BACH2
(
Sus scrofa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSSSCG00000004332
T061416_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BACH2
M04247_2.00
Homo sapiens
NWWNCATGASTCATSNHWN
NWDNSATGASTCATGNWWN
SELEX
Yin et al.(2017)
BACH2_eDBD_HT-SELEX_1
0.817
1.000
BACH2
M04248_2.00
Homo sapiens
DWANSATGACGTSATSNTWD
HWANSATSACGTCATSNTWH
SELEX
Yin et al.(2017)
BACH2_eDBD_HT-SELEX_2
0.817
1.000
BACH2
M08065_2.00
Homo sapiens
NVTGACTCAGCANN
NNTGCTGAGTCABN
ChIP-seq
Mathelier et al.(2014)
MA1101.1
0.817
1.000
BACH2
M08787_2.00
Homo sapiens
VTGASTCAGCA
TGCTGASTCAB
Misc
Kulakovskiy et al.(2013)
BACH2_HUMAN.H11MO.0.A
0.817
1.000
BACH2
M09484_2.00
Homo sapiens
TGASTCAGCN
NGCTGASTCA
Misc
Heinz et al.(2010)
OCILy7-Bach2_GSE44420
0.817
1.000
BACH2
M09938_2.00
Homo sapiens
BVTGACKCAYS
SRTGMGTCABV
Transfac
Matys et al.(2006)
V$BACH2_01
0.817
1.000
BACH2
M04249_2.00
Homo sapiens
NWANCATGASTCATSNWWN
NWWNSATGASTCATGNTWN
SELEX
Yin et al.(2017)
BACH2_eDBD_Methyl-HT-SELEX
0.817
1.000
Bach2
M08832_2.00
Mus musculus
RTGACTCAGCN
NGCTGAGTCAY
Misc
Kulakovskiy et al.(2013)
BACH2_MOUSE.H11MO.0.A
0.817
0.972
BACH1
M08184_2.00
Homo sapiens
RTCACGTG
CACGTGAY
ChIP-seq
Contrino et al.(2012)
Mv45
0.796
0.889
BACH1
M08185_2.00
Homo sapiens
TGASTCAGCA
TGCTGASTCA
ChIP-seq
Contrino et al.(2012)
Mv46
0.796
0.889
BACH1
M08186_2.00
Homo sapiens
TCAGCADTT
AAHTGCTGA
ChIP-seq
Contrino et al.(2012)
Mv47
0.796
0.889
BACH1
M08800_2.00
Homo sapiens
VNVTGACTCAGCA
TGCTGAGTCABNB
Misc
Kulakovskiy et al.(2013)
BACH1_HUMAN.H11MO.0.A
0.796
0.889
Bach1
M08823_2.00
Mus musculus
ASCRTGACTCAGCR
YGCTGAGTCAYGST
Misc
Kulakovskiy et al.(2013)
BACH1_MOUSE.H11MO.0.C
0.796
0.889
BACH1
M09488_2.00
Homo sapiens
RTGACTCAGCANWWH
DWWNTGCTGAGTCAY
Misc
Heinz et al.(2010)
K562-Bach1_GSE31477
0.796
0.889
BACH1
M09975_2.00
Homo sapiens
VNBATGACTCATSNB
VNSATGAGTCATVNB
Transfac
Matys et al.(2006)
V$BACH1_01
0.796
0.889
BACH1
M09976_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BACH1_Q3
0.796
0.889
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000004676
bZIP
650
685
IHDVRRRSKNRIAAQRCRKRKLDCIQNLECEIRKLV
Links
Other
bZIP
family TFs
Other
Sus scrofa
TFs
140 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29596.m000719
Ricinus communis
29596.m000719
N
29838.m001723
Ricinus communis
29838.m001723
N
Aquca_007_00525
Aquilegia coerulea
Aquca_007_00525
N
Bostr.15774s0100
Boechera stricta
Bostr.15774s0100
N
BRADI1G12330
Brachypodium distachyon
BRADI1G12330
N
cassava1723.valid.m1
Manihot esculenta
cassava1723.valid.m1
N
cassava2865.m1
Manihot esculenta
cassava2865.m1
N
cassava6877.valid.m1
Manihot esculenta
cassava6877.valid.m1
N
Ca_01470
Cicer arietinum
Ca_01470
N
Ciclev10001533m.g
Citrus clementina
Ciclev10001533m.g
N
Ciclev10028671m.g
Citrus clementina
Ciclev10028671m.g
N
Cla022485
Citrullus lanatus
Cla022485
N
Cucsa.160520
Cucumis sativus
Cucsa.160520
N
Eucgr.F00433
Eucalyptus grandis
Eucgr.F00433
N
evm.TU.supercontig_21.35
Carica papaya
evm.TU.supercontig_21.35
N
F775_05698
Aegilops tauschii
F775_05698
N
F775_32334
Aegilops tauschii
F775_32334
N
GATA18
Oryza indica
BGIOSGA010036
N
GATA18
Oryza sativa
OS03G0684000
N
GLYMA04G10340
Glycine max
GLYMA04G10340
N
GLYMA06G10290
Glycine max
GLYMA06G10290
N
Gorai.002G138300
Gossypium raimondii
Gorai.002G138300
N
Gorai.005G226000
Gossypium raimondii
Gorai.005G226000
N
Gorai.010G033400
Gossypium raimondii
Gorai.010G033400
N
LjT45A20.140.nd
Lotus japonicus
LjT45A20.140.nd
N
LPERR03G24620
Leersia perrieri
LPERR03G24620
N
MDP0000192617
Malus domestica
MDP0000192617
N
mgf001782m
Mimulus guttatus
mgf001782m
N
MLOC_57142
Hordeum vulgare
MLOC_57142
N
MLOC_6017
Hordeum vulgare
MLOC_6017
N
MTR_3g100040
Medicago truncatula
MTR_3g100040
N
OBART03G29860
Oryza barthii
OBART03G29860
N
OGLUM03G30120
Oryza glumaepatula
OGLUM03G30120
N
OLONG_006862
Oryza longistaminata
OLONG_006862
N
OMERI03G26130
Oryza meridionalis
OMERI03G26130
N
ONIVA03G31130
Oryza nivara
ONIVA03G31130
N
OPUNC03G27170
Oryza punctata
OPUNC03G27170
N
orange1.1g017195m.g
Citrus sinensis
orange1.1g017195m.g
N
orange1.1g017348m.g
Citrus sinensis
orange1.1g017348m.g
N
ORGLA01G0401200
Oryza glaberrima
ORGLA01G0401200
N
ORUFI03G31080
Oryza rufipogon
ORUFI03G31080
N
Pavir.Ib04266
Panicum virgatum
Pavir.Ib04266
N
Pavir.J38243
Panicum virgatum
Pavir.J38243
N
PGSC0003DMG400009353
Solanum tuberosum
PGSC0003DMG400009353
N
PGSC0003DMG400010684
Solanum tuberosum
PGSC0003DMG400010684
N
PK22222.1
Cannabis sativa
PK22222.1
N
Pm004389
Prunus mume
Pm004389
N
POPTR_0005s19550
Populus trichocarpa
POPTR_0005s19550
N
POPTR_0007s03120
Populus trichocarpa
POPTR_0007s03120
N
POPTR_0017s06970
Populus trichocarpa
POPTR_0017s06970
N
PRUPE_ppa008377mg
Prunus persica
PRUPE_ppa008377mg
N
SapurV1A.0004s0640
Salix purpurea
SapurV1A.0004s0640
N
SapurV1A.0187s0160
Salix purpurea
SapurV1A.0187s0160
N
SapurV1A.1216s0090
Salix purpurea
SapurV1A.1216s0090
N
Sb01g011840
Sorghum bicolor
Sb01g011840
N
Si036492m.g
Setaria italica
Si036492m.g
N
Solyc01g106040.2
Solanum lycopersicum
Solyc01g106040.2
N
TCM_007358
Theobroma cacao
TCM_007358
N
TCM_034531
Theobroma cacao
TCM_034531
N
Traes_4AL_B6992AAA6
Triticum aestivum
Traes_4AL_B6992AAA6
N
Traes_4BS_ACD70539F
Triticum aestivum
Traes_4BS_ACD70539F
N
Traes_4DS_AFCEDDE67
Triticum aestivum
Traes_4DS_AFCEDDE67
N
TRIUR3_15386
Triticum urartu
TRIUR3_15386
N
TRIUR3_23258
Triticum urartu
TRIUR3_23258
N
VIT_18s0001g07730
Vitis vinifera
VIT_18s0001g07730
N
XM_002302327.1
Populus trichocarpa
POPTR_0002s11140
N