AtbZIP3 (Arabidopsis lyrata)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 fgenesh2_kg.6__1562__AT5G15830.1 T062374_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATBZIP42
M06775_2.00 		Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_col_a 		0.871 0.806
ATBZIP42
M06776_2.00 		Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a 		0.871 0.806
OS02G0266800
M10046_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RITA1_01 		0.790 0.468
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.6__1562__AT5G15830.1 bZIP 71 132

Links

Other bZIP family TFs
Other Arabidopsis lyrata TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30131.m007078 Ricinus communis 30131.m007078 I 0.812
30138.m003866 Ricinus communis 30138.m003866 I 0.827
AMTR_s00006p00259200 Amborella trichopoda AMTR_s00006p00259200 I 0.793
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.803
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.849
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.871
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.790
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.790
Bo2g012800 Brassica oleracea Bo2g012800 I 0.890
Bo3g010620 Brassica oleracea Bo3g010620 I 0.871
Bo3g010750 Brassica oleracea Bo3g010750 I 0.861
Bo9g163740 Brassica oleracea Bo9g163740 I 0.878
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.890
Bra006324 Brassica rapa Bra006324 I 0.861
Bra008670 Brassica rapa Bra008670 I 0.878
Bra023540 Brassica rapa Bra023540 I 0.881
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.885
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.876
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.812
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.827
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.808
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.790
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.794
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.827
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.857
Ca_09362 Cicer arietinum Ca_09362 I 0.819
Ca_17416 Cicer arietinum Ca_17416 I 0.813
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.811
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.827
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.807
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.797
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.804
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.841
Cla005975 Citrullus lanatus Cla005975 I 0.827
Cla016748 Citrullus lanatus Cla016748 I 0.864
Cla016841 Citrullus lanatus Cla016841 I 0.800
Cla020641 Citrullus lanatus Cla020641 I 0.834
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.789
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.857
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.864
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.834
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.788
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.871
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I 0.793
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.812
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.827
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.799
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.827
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.818
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.827
GLYMA04G01210 Glycine max GLYMA04G01210 I 0.785
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.789
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.814
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.812
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.812
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.818
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.852
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.827
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.796
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.783
GRMZM2G020799 Zea mays GRMZM2G020799 I 0.802
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.790
GSMUA_Achr10G20720_001 Musa acuminata GSMUA_Achr10G20720_001 I 0.783
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.790
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.809
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I 0.793
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.790
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I 0.796
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.784
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.792
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.810
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.832
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.832
MDP0000183562 Malus domestica MDP0000183562 I 0.830
MDP0000205823 Malus domestica MDP0000205823 I 0.791
MDP0000239026 Malus domestica MDP0000239026 I 0.808
MDP0000863909 Malus domestica MDP0000863909 I 0.848
MDP0000891108 Malus domestica MDP0000891108 I 0.830
MDP0000891899 Malus domestica MDP0000891899 I 0.793
mgf003466m Mimulus guttatus mgf003466m I 0.792
mgf007535m Mimulus guttatus mgf007535m I 0.782
mgf013074m Mimulus guttatus mgf013074m I 0.782
mgf017392m Mimulus guttatus mgf017392m I 0.862
mgf021986m Mimulus guttatus mgf021986m I 0.791
MLOC_62430 Hordeum vulgare MLOC_62430 I 0.793
MTR_4g097440 Medicago truncatula MTR_4g097440 I 0.798
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.817
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.832
OBART02G05680 Oryza barthii OBART02G05680 I 0.790
OBART02G11580 Oryza barthii OBART02G11580 I 0.790
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.790
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.790
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.790
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.790
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.790
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.790
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.790
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.797
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.807
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.841
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.804
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.790
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.790
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.790
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.790
OS02G0175100 Oryza sativa OS02G0175100 I 0.790
OS02G0266800 Oryza sativa OS02G0266800 D 0.790
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.790
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.790
Pavir.Ba01782 Panicum virgatum Pavir.Ba01782 I 0.787
Pavir.Bb02514 Panicum virgatum Pavir.Bb02514 I 0.788
PDK_20s1520551g003 Phoenix dactylifera PDK_20s1520551g003 I 0.789
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.846
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.821
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.812
PK07533.1 Cannabis sativa PK07533.1 I 0.799
Pm002353 Prunus mume Pm002353 I 0.796
Pm015434 Prunus mume Pm015434 I 0.857
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.803
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.804
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.827
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.793
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.825
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I 0.816
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.796
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.832
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.857
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.825
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.823
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.787
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.790
Si017778m.g Setaria italica Si017778m.g I 0.790
Si019897m.g Setaria italica Si019897m.g I 0.795
Si031238m.g Setaria italica Si031238m.g I 0.788
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.787
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.828
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.846
TCM_000835 Theobroma cacao TCM_000835 I 0.796
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.881
Traes_6AL_E0ED0DE45 Triticum aestivum Traes_6AL_E0ED0DE45 I 0.793
Traes_6DL_77ACE1279 Triticum aestivum Traes_6DL_77ACE1279 I 0.793
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.827
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.812
VIT_05s0077g01140 Vitis vinifera VIT_05s0077g01140 I 0.785