TMUE_s0169000400 (Trichuris muris)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 TMUE_s0169000400 T075413_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Crem
M01821_2.00 		Mus musculus
NRTKACGTMN
NKACGTMAYN		 PBM
Weirauch et al.(2014)
pTH5002 		0.851 0.850
Crem
M08845_2.00 		Mus musculus
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C 		0.851 0.850
Creb1
M00992_2.00 		Mus musculus
NNTGACGTCV
BGACGTCANN		 PBM
Mann et al.(2013)
CREB1_UM_HK 		0.845 0.833
Creb1
M01806_2.00 		Mus musculus
VTKACGHNN
NNDCGTMAB		 PBM
Weirauch et al.(2014)
pTH5080 		0.845 0.833
CREB1
M04264_2.00 		Homo sapiens
NVTKACGTMABN
NVTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX 		0.845 0.833
CREB1
M04258_2.00 		Homo sapiens
NVTKACGTMANN
NNTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1 		0.845 0.833
CREB1
M04259_2.00 		Homo sapiens
NRTGACGTR
YACGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2 		0.845 0.833
CREB1
M04260_2.00 		Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3 		0.845 0.833
CREB1
M04022_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1 		0.845 0.833
CREB1
M04023_2.00 		Homo sapiens
RTGACGTADB
VHTACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2 		0.845 0.833
CREB1
M08066_2.00 		Homo sapiens
NVTGACGTCABN
NVTGACGTCABN		 ChIP-seq
Mathelier et al.(2014)
MA0018.3 		0.845 0.833
CREB1
M08791_2.00 		Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A 		0.845 0.833
Creb1
M08824_2.00 		Mus musculus
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A 		0.845 0.833
CREB1
M09948_2.00 		Homo sapiens
TGACGTMW
WKACGTCA		 Transfac
Matys et al.(2006)
V$CREB_01 		0.845 0.833
CREB1
M09949_2.00 		Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV		 Transfac
Matys et al.(2006)
V$CREB_02 		0.845 0.833
CREB1
M09950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q3 		0.845 0.833
CREB1
M09951_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q6 		0.845 0.833
CREB1
M09952_2.00 		Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q2 		0.845 0.833
CREB1
M09953_2.00 		Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q4 		0.845 0.833
CREB1
M09954_2.00 		Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM		 Transfac
Matys et al.(2006)
V$TAXCREB_01 		0.845 0.833
CREB1
M09955_2.00 		Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY		 Transfac
Matys et al.(2006)
V$TAXCREB_02 		0.845 0.833
Creb1
M00991_2.00 		Mus musculus
NNRTGACGYVN
NBRCGTCAYNN		 PBM
Mann et al.(2013)
CREB1_M_HK 		0.845 0.833
CREB1
M04265_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX 		0.845 0.833
CREB1
M04261_2.00 		Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1 		0.845 0.833
CREB1
M04262_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2 		0.845 0.833
CREB1
M04263_2.00 		Homo sapiens
NRTGACGYV
BRCGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3 		0.845 0.833
ATF1
M08792_2.00 		Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD		 Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B 		0.834 0.750
ATF1
M09485_2.00 		Homo sapiens
NVTGACGTMA
TKACGTCABN		 Misc
Heinz et al.(2010)
K562-ATF1_GSE31477 		0.834 0.750
ATF1
M09956_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q3 		0.834 0.750
ATF1
M09957_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6_01 		0.834 0.750
ATF1
M09958_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6 		0.834 0.750
CREM
M04229_2.00 		Homo sapiens
VVTBACGTVABN
NVTBACGTVABB		 SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX 		0.832 0.750
CREM
M08784_2.00 		Homo sapiens
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C 		0.832 0.750
CREM
M09930_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6_01 		0.832 0.750
CREM
M09931_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6 		0.832 0.750
CREM
M04230_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX 		0.832 0.750
Atf1
M00124_2.00 		Mus musculus
NNNNDNDNNN
NNNHNHNNNN		 PBM
Badis et al.(2009)
Atf1_3026 		0.824 0.733
Atf1
M01804_2.00 		Mus musculus
RTGACGTV
BACGTCAY		 PBM
Weirauch et al.(2014)
pTH5005 		0.824 0.733
Atf1
M08820_2.00 		Mus musculus
VTGACGTSAV
BTSACGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B 		0.824 0.733
CrebB-17A
M03659_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_1 		0.799 0.783
CrebB-17A
M03660_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_2 		0.799 0.783
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TMUE_s0169000400 bZIP 218 277

Links

Other bZIP family TFs
Other Trichuris muris TFs

357 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30190.m010825 Ricinus communis 30190.m010825 I 0.000
Aquca_037_00132 Aquilegia coerulea Aquca_037_00132 I 0.000
BGIOSGA017525 Oryza indica BGIOSGA017525 N 0.000
Bostr.29223s0053 Boechera stricta Bostr.29223s0053 I 0.000
BRADI2G15847 Brachypodium distachyon BRADI2G15847 N 0.000
BRADI5G16450 Brachypodium distachyon BRADI5G16450 I 0.000
Cagra.0062s0002 Capsella grandiflora Cagra.0062s0002 I 0.000
Carubv10020622m.g Capsella rubella Carubv10020622m.g I 0.000
chr2.CM0060.390.nc Lotus japonicus chr2.CM0060.390.nc I 0.000
Ciclev10021265m.g Citrus clementina Ciclev10021265m.g I 0.000
Cla011093 Citrullus lanatus Cla011093 I 0.000
Cla011559 Citrullus lanatus Cla011559 I 0.000
Cucsa.303840 Cucumis sativus Cucsa.303840 I 0.000
ERF061 Arabidopsis thaliana AT1G64380 I 0.000
Eucgr.D01731 Eucalyptus grandis Eucgr.D01731 I 0.000
Eucgr.E00857 Eucalyptus grandis Eucgr.E00857 I 0.000
evm.TU.supercontig_79.43 Carica papaya evm.TU.supercontig_79.43 I 0.000
fgenesh2_kg.2__42__AT1G64380.1 Arabidopsis lyrata fgenesh2_kg.2__42__AT1G64380.1 I 0.000
gene32084-v1.0-hybrid Fragaria vesca gene32084-v1.0-hybrid I 0.000
GLYMA01G43450 Glycine max GLYMA01G43450 I 0.000
GLYMA11G02050 Glycine max GLYMA11G02050 I 0.000
Gorai.006G207800 Gossypium raimondii Gorai.006G207800 I 0.000
Gorai.007G026200 Gossypium raimondii Gorai.007G026200 N 0.000
Gorai.008G253900 Gossypium raimondii Gorai.008G253900 I 0.000
Gorai.012G130600 Gossypium raimondii Gorai.012G130600 I 0.000
GRMZM2G026926 Zea mays GRMZM2G026926 I 0.000
GRMZM2G100982 Zea mays GRMZM2G100982 I 0.000
GRMZM5G846057 Zea mays GRMZM5G846057 I 0.000
GSMUA_Achr1G00070_001 Musa acuminata GSMUA_Achr1G00070_001 I 0.000
GSMUA_Achr1G27990_001 Musa acuminata GSMUA_Achr1G27990_001 N 0.000
LPERR05G22130 Leersia perrieri LPERR05G22130 N 0.000
Lus10001898.g Linum usitatissimum Lus10001898.g I 0.000
Lus10003889.g Linum usitatissimum Lus10003889.g I 0.000
MDP0000292965 Malus domestica MDP0000292965 I 0.000
MDP0000861708 Malus domestica MDP0000861708 I 0.000
mgf016403m Mimulus guttatus mgf016403m I 0.000
mgf021167m Mimulus guttatus mgf021167m I 0.000
MLOC_53577 Hordeum vulgare MLOC_53577 N 0.000
OGLUM05G28130 Oryza glumaepatula OGLUM05G28130 N 0.000
ONIVA05G28560 Oryza nivara ONIVA05G28560 N 0.000
OPUNC05G24070 Oryza punctata OPUNC05G24070 N 0.000
orange1.1g045091m.g Citrus sinensis orange1.1g045091m.g I 0.000
ORGLA03G0412600 Oryza glaberrima ORGLA03G0412600 N 0.000
ORGLA05G0229700 Oryza glaberrima ORGLA05G0229700 N 0.000
ORUFI05G28440 Oryza rufipogon ORUFI05G28440 N 0.000
Pavir.Ga00913 Panicum virgatum Pavir.Ga00913 I 0.000
Pavir.Gb00710 Panicum virgatum Pavir.Gb00710 I 0.000
Pavir.J01332 Panicum virgatum Pavir.J01332 N 0.000
Pavir.J10163 Panicum virgatum Pavir.J10163 N 0.000
Pm024053 Prunus mume Pm024053 I 0.000
POPTR_0001s10540 Populus trichocarpa POPTR_0001s10540 I 0.000
PRUPE_ppa009005mg Prunus persica PRUPE_ppa009005mg I 0.000
SapurV1A.0035s0570 Salix purpurea SapurV1A.0035s0570 I 0.000
SapurV1A.0237s0310 Salix purpurea SapurV1A.0237s0310 I 0.000
Sb06g023313 Sorghum bicolor Sb06g023313 I 0.000
Sb09g029070 Sorghum bicolor Sb09g029070 N 0.000
Si012169m.g Setaria italica Si012169m.g I 0.000
Thhalv10023588m.g Eutrema salsugineum Thhalv10023588m.g I 0.000
VIT_19s0014g03180 Vitis vinifera VIT_19s0014g03180 I 0.000