CGI_10016115 (Crassostrea gigas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CGI_10016115 T083520_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.807 0.945
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.807 0.945
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.807 0.945
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.807 0.945
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.807 0.945
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC32444 C2H2 ZF 22 48
EKC32444 C2H2 ZF 54 78
EKC32444 C2H2 ZF 84 108
EKC32444 C2H2 ZF 114 138

Links

Other C2H2 ZF family TFs
Other Crassostrea gigas TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGAP001291 Anopheles gambiae AGAP001291 I 0.816
ANCCEY_00370 Ancylostoma ceylanicum ANCCEY_00370 I 0.764
CGI_10016117 Crassostrea gigas CGI_10016117 I 0.781
Cmyd_10016551 Chelonia mydas Cmyd_10016551 I 0.788
csin109208 Clonorchis sinensis csin109208 I 0.781
DAPPUDRAFT_290567 Daphnia pulex DAPPUDRAFT_290567 I 0.807
ENSACAG00000003701 Anolis carolinensis ENSACAG00000003701 I 0.786
ENSAMXG00000000658 Astyanax mexicanus ENSAMXG00000000658 I 0.768
ENSAMXG00000012318 Astyanax mexicanus ENSAMXG00000012318 I 0.792
ENSCSAVG00000001907 Ciona savignyi ENSCSAVG00000001907 I 0.778
ENSDORG00000012706 Dipodomys ordii ENSDORG00000012706 I 0.783
ENSGMOG00000004419 Gadus morhua ENSGMOG00000004419 I 0.795
ENSMMUP00000019456 Macaca fascicularis ENSMMUP00000019456 I 0.783
ENSOANG00000012152 Ornithorhynchus anatinus ENSOANG00000012152 I 0.786
ENSONIG00000002719 Oreochromis niloticus ENSONIG00000002719 I 0.792
ENSPFOG00000012980 Poecilia formosa ENSPFOG00000012980 I 0.792
ENSPPYG00000005471 Pongo abelii ENSPPYG00000005471 I 0.783
ENSSHAG00000015025 Sarcophilus harrisii ENSSHAG00000015025 I 0.797
GA10924 Drosophila pseudoobscura FBgn0070980 I 0.807
GB54250 Apis mellifera GB54250 I 0.805
GD19752 Drosophila simulans FBgn0191241 I 0.807
GF18915 Drosophila ananassae FBgn0095929 I 0.807
GG12590 Drosophila erecta FBgn0104878 I 0.807
GH23039 Drosophila grimshawi FBgn0130496 I 0.807
GI10245 Drosophila mojavensis FBgn0133010 I 0.807
GJ11051 Drosophila virilis FBgn0198317 I 0.807
GK13239 Drosophila willistoni FBgn0215248 I 0.807
GL21621 Drosophila persimilis FBgn0159214 I 0.807
GM10780 Drosophila sechellia FBgn0165726 I 0.807
HelroG77001 Helobdella robusta HelroG77001 N 0.760
KGM_22387 Danaus plexippus KGM_22387 I 0.819
macho1 Ciona intestinalis ENSCING00000007968 I 0.778
MDOA000052 Musca domestica MDOA000052 I 0.798
NEMVEDRAFT_v1g121215 Nematostella vectensis NEMVEDRAFT_v1g121215 I 0.761
NEMVEDRAFT_v1g25267 Nematostella vectensis NEMVEDRAFT_v1g25267 I 0.786
nLs.2.1.2.g02824 Litomosoides sigmodontis nLs.2.1.2.g02824 I 0.772
nRc.2.0.1.g22468 Romanomermis culicivorax nRc.2.0.1.g22468 I 0.819
NV11451 Nasonia vitripennis NV11451 I 0.816
Ogr17257 Ophisaurus gracilis Ogr17257 I 0.786
opa Drosophila melanogaster FBgn0003002 D 0.807
Pvit_01334 Pogona vitticeps Pvit_01334 I 0.797
Sakowv30026420m.g Saccoglossus kowalevskii Sakowv30026420m.g I 0.812
SMU15031708 Schmidtea mediterranea SMU15031708 I 0.777
SMU15033928 Schmidtea mediterranea SMU15033928 I 0.772
SNAPOd2T00002718001 Oikopleura dioica SNAPOd2T00002718001 I 0.792
SPAL_0001746600 Strongyloides papillosus SPAL_0001746600 I 0.765
SSTP_0000201100 Strongyloides stercoralis SSTP_0000201100 I 0.765
SVE_0347600 Strongyloides venezuelensis SVE_0347600 I 0.765
T265_00048 Opisthorchis viverrini T265_00048 I 0.781
TC010234 Tribolium castaneum TC010234 I 0.819
TCLT_0000586501 Thelazia callipaeda TCLT_0000586501 I 0.772
tetur11g00650 Tetranychus urticae tetur11g00650 I 0.794
TMUE_s0101002100 Trichuris muris TMUE_s0101002100 I 0.787
WBGene00239980 Onchocerca volvulus WBGene00239980 I 0.772
XP_002153782.1 Hydra magnipapillata XP_002153782.1 I 0.773
XP_002159358.1 Hydra magnipapillata XP_002159358.1 I 0.780
ZIC1 Monodelphis domestica ENSMODG00000021251 I 0.797
ZIC5 Oryctolagus cuniculus ENSOCUG00000026498 I 0.783
ZIC5 Sus scrofa ENSSSCG00000009521 I 0.783
ZIC5 Ochotona princeps ENSOPRG00000007526 I 0.783
zic6 Danio rerio ENSDARG00000071496 I 0.792